STRINGSTRING
Wdr46 Wdr46 Rpl10a Rpl10a Rpp21 Rpp21 Rplp0 Rplp0 Pwp2 Pwp2 Rpl24 Rpl24 Utp18 Utp18 Ddx52 Ddx52 Tsr1 Tsr1 Utp3 Utp3 Ddx49 Ddx49 Rpl23 Rpl23 Rps29 Rps29 Dcaf13 Dcaf13 Pes1 Pes1 Fcf1 Fcf1 Rpl19 Rpl19 Utp25 Utp25 Pno1 Pno1 C1d C1d Utp20 Utp20 Bms1 Bms1 Snu13 Snu13 Rpl7 Rpl7 Nop56 Nop56 Utp11 Utp11 LOC100911372 LOC100911372 Rpl15 Rpl15 Ddx47 Ddx47 Tex10 Tex10 Exosc2 Exosc2 Ftsj3 Ftsj3 Rpl4 Rpl4 Nol9 Nol9 Rpl32 Rpl32 Exosc10 Exosc10 Rpl29 Rpl29 Rpl22 Rpl22 Csnk1d Csnk1d Eri1 Eri1 Isg20l2 Isg20l2 Rpl22l1 Rpl22l1 Las1l Las1l Rps3a Rps3a Xrn2 Xrn2 Exosc4 Exosc4 Exosc3 Exosc3 Wdr18 Wdr18 Riok2 Riok2 Emg1 Emg1 Rrp9 Rrp9 Csnk1e Csnk1e Tbl3 Tbl3 Senp3 Senp3 Rplp1 Rplp1 Riok1 Riok1 Utp6 Utp6 Rpl35 Rpl35 Rpl27a Rpl27a Rpl3l Rpl3l Ltv1 Ltv1 Rpl13 Rpl13 Exosc9 Exosc9 Rps12 Rps12 Utp15 Utp15 Rps23 Rps23 Nop58 Nop58 Rps27 Rps27 Rpl38-ps3 Rpl38-ps3 Imp3 Imp3 Wdr12 Wdr12 Rps3 Rps3 Rrp36 Rrp36 Ncl Ncl Bop1 Bop1 Exosc6 Exosc6 Rpsa Rpsa Rpp25 Rpp25 Rpp30 Rpp30 Rpl18a Rpl18a Fbl Fbl Pelp1 Pelp1 Rps5 Rps5 Rps16 Rps16 Wdr3 Wdr3 Uba52 Uba52 Rps19 Rps19 Pdcd11 Pdcd11 Utp4 Utp4 Nip7 Nip7 Rpl13a Rpl13a Exosc5 Exosc5 Rpl27 Rpl27 Rpl18 Rpl18 Dis3 Dis3 Rpl31 Rpl31 Nob1 Nob1 Rps25 Rps25 Rrp7a Rrp7a Wdr43 Wdr43 Riok3 Riok3 Rps15 Rps15 Gnl3 Gnl3 Rpl5 Rpl5 Rps13 Rps13 Mphosph10 Mphosph10 Rpl6 Rpl6 LOC100911575 LOC100911575 Dhx37 Dhx37 LOC100360781 LOC100360781 Rpl17-2 Rpl17-2 Rpl39l Rpl39l Rpl10l Rpl10l LOC103690821 LOC103690821 LOC102555453 LOC102555453 LOC100360449 LOC100360449 D4A771_RAT D4A771_RAT RGD1566373 RGD1566373 Rps21-2 Rps21-2 RGD1564606 RGD1564606 Rps10l1 Rps10l1 Rps4x Rps4x Rcl1 Rcl1 D3ZZ95_RAT D3ZZ95_RAT D4AD70_RAT D4AD70_RAT D3ZPN7_RAT D3ZPN7_RAT LOC100360117 LOC100360117 D4A6B9_RAT D4A6B9_RAT Rps18l1 Rps18l1 Bud23 Bud23 Rpl36al Rpl36al D3ZDE0_RAT D3ZDE0_RAT LOC100363469 LOC100363469 Rpl31l4 Rpl31l4 Rps4y2 Rps4y2 Rpl6-ps1 Rpl6-ps1 Utp14a Utp14a Noc4l Noc4l D3ZJD3_RAT D3ZJD3_RAT Rpl30 Rpl30 Rpp38 Rpp38 D4A4W9_RAT D4A4W9_RAT Rpl28 Rpl28 Rps14 Rps14 Mtrex Mtrex rCG_34378 rCG_34378 D4A1Z2_RAT D4A1Z2_RAT Rpp14 Rpp14 Rpl36 Rpl36 Krr1 Krr1 Nol6 Nol6 Rps28 Rps28 Rpl3 Rpl3 Rps11 Rps11 Imp4 Imp4 Rpp40 Rpp40 Ddx21 Ddx21 Heatr1 Heatr1 RGD1561635 RGD1561635 RGD1564617 RGD1564617 Ebna1bp2 Ebna1bp2 LOC100359951 LOC100359951 LOC688637 LOC688637 Exosc1 Exosc1 Bysl Bysl Mphosph6 Mphosph6 Exosc7 Exosc7 Rpl10 Rpl10 Rps27l Rps27l Rpl12-ps1 Rpl12-ps1 Rpl26 Rpl26 Nop14 Nop14 Nol11 Nol11 Rpl11 Rpl11 Rpl14 Rpl14 Exosc8 Exosc8 Ubc Ubc Rps8 Rps8 Rps9 Rps9 Wdr75 Wdr75 Rps15a Rps15a Rps7 Rps7
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Wdr46WD repeat domain 46. (609 aa)
Rpl10a60S ribosomal protein L10a; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL1 family. (217 aa)
Rpp21Ribonuclease P 21 subunit (Human), isoform CRA_c. (150 aa)
Rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
Pwp2PWP2, small subunit processome component. (920 aa)
Rpl2460S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family. (156 aa)
Utp18UTP18 small subunit processome component. (546 aa)
Ddx52Probable ATP-dependent RNA helicase DDX52; Belongs to the DEAD box helicase family. DDX52/ROK1 subfamily. (598 aa)
Tsr1TSR1, ribosome maturation factor. (804 aa)
Utp3Something about silencing protein 10; Essential for gene silencing: has a role in the structure of silenced chromatin. Plays a role in the developing brain (By similarity). (470 aa)
Ddx49DEAD-box helicase 49; Belongs to the DEAD box helicase family. (480 aa)
Rpl2360S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
Rps2940S ribosomal protein S29. (56 aa)
Dcaf13DDB1 and CUL4-associated factor 13. (445 aa)
Pes1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (586 aa)
Fcf1Similar to CGI-35 protein (Predicted), isoform CRA_a. (198 aa)
Rpl1960S ribosomal protein L19. (196 aa)
Utp25Digestive organ expansion factor homolog; Regulates the p53 pathway to control the expansion growth of digestive organs; Belongs to the def family. (763 aa)
Pno1RNA-binding protein PNO1; Positively regulates dimethylation of two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA. Belongs to the PNO1 family. (251 aa)
C1dSimilar to small unique nuclear receptor co-repressor (Predicted). (141 aa)
Utp20UTP20 small subunit processome component. (2788 aa)
Bms1BMS1 ribosome biogenesis factor. (1064 aa)
Snu13NHP2-like protein 1, N-terminally processed; Involved in pre-mRNA splicing as component of the spliceosome. Binds to the 5'-stem-loop of U4 snRNA and thereby contributes to spliceosome assembly. The protein undergoes a conformational change upon RNA-binding. (128 aa)
Rpl760S ribosomal protein L7; Component of the large ribosomal subunit (By similarity). Binds to G-rich structures in 28S rRNA and in mRNAs. Plays a regulatory role in the translation apparatus; inhibits cell-free translation of mRNAs (By similarity); Belongs to the universal ribosomal protein uL30 family. (260 aa)
Nop56NOP56 ribonucleoprotein. (588 aa)
Utp11Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
LOC10091137240S ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA. (247 aa)
Rpl1560S ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
Ddx47DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a; Belongs to the DEAD box helicase family. (455 aa)
Tex10Testis expressed gene 10 (Predicted). (929 aa)
Exosc2Exosome component 2 (Predicted). (293 aa)
Ftsj3pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3; RNA 2'-O-methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. (829 aa)
Rpl460S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family. (421 aa)
Nol9Nucleolar protein 9. (714 aa)
Rpl3260S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family. (135 aa)
Exosc10RCG30986, isoform CRA_a. (885 aa)
Rpl2960S ribosomal protein L29; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL29 family. (156 aa)
Rpl2260S ribosomal protein L22. (128 aa)
Csnk1dCasein kinase I isoform delta; Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. In balance with PP1, dete [...] (428 aa)
Eri13'-5' exoribonuclease 1; RNA exonuclease that binds to the 3'-end of histone mRNAs and degrades them, suggesting that it plays an essential role in histone mRNA decay after replication. A 2' and 3'-hydroxyl groups at the last nucleotide of the histone 3'-end is required for efficient degradation of RNA substrates. Also able to degrade the 3'-overhangs of short interfering RNAs (siRNAs) in vitro, suggesting a possible role as regulator of RNA interference (RNAi). Binds with high affinity to the 3' side of the stem-loop structure and to the downstream cleavage product (DCP) of histone pr [...] (345 aa)
Isg20l2Interferon-stimulated 20 kDa exonuclease-like 2; 3'-> 5'-exoribonuclease involved in ribosome biogenesis in the processing of the 12S pre-rRNA. Displays a strong specificity for a 3'-end containing a free hydroxyl group (By similarity). (369 aa)
Rpl22l1Ribosomal protein L22-like 1. (122 aa)
Las1lLAS1-like, ribosome biogenesis factor. (762 aa)
Rps3a40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
Xrn25'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (951 aa)
Exosc4Exosome component 4. (245 aa)
Exosc3Exosome component 3. (219 aa)
Wdr18WD repeat-containing protein 18; Functions as a component of the Five Friends of Methylated CHTOP (5FMC) complex; the 5FMC complex is recruited to ZNF148 by methylated CHTOP, leading to desumoylation of ZNF148 and subsequent transactivation of ZNF148 target genes (By similarity). Component of the PELP1 complex involved in the nucleolar steps of 28S rRNA maturation and the subsequent nucleoplasmic transit of the pre-60S ribosomal subunit (By similarity). (431 aa)
Riok2RIO kinase 2 (Yeast), isoform CRA_b. (551 aa)
Emg1EMG1 nucleolar protein homolog (S. cerevisiae) (Predicted), isoform CRA_b. (244 aa)
Rrp9Ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (Yeast). (478 aa)
Csnk1eCasein kinase 1, epsilon. (506 aa)
Tbl3Transducin beta-like protein 3. (800 aa)
Senp3SUMO/sentrin specific peptidase 3. (568 aa)
Rplp160S acidic ribosomal protein P1; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
Riok1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (566 aa)
Utp6UTP6 small subunit processome component. (596 aa)
Rpl3560S ribosomal protein L35; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL29 family. (123 aa)
Rpl27a60S ribosomal protein L27a. (148 aa)
Rpl3lRibosomal protein L3-like; Belongs to the universal ribosomal protein uL3 family. (407 aa)
Ltv1Protein LTV1 homolog; Belongs to the LTV1 family. (470 aa)
Rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
Exosc9Exosome complex component RRP45; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] (437 aa)
Rps1240S ribosomal protein S12. (132 aa)
Utp15U3 small nucleolar RNA-associated protein 15 homolog; Involved in nucleolar processing of pre-18S ribosomal RNA. (528 aa)
Rps2340S ribosomal protein S23; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (143 aa)
Nop58Nucleolar protein 58; Required for 60S ribosomal subunit biogenesis (By similarity). Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such as U3, U8 and U14 snoRNAs (By similarity). Belongs to the NOP5/NOP56 family. (534 aa)
Rps2740S ribosomal protein S27; Component of the small ribosomal subunit (By similarity). Required for proper rRNA processing and maturation of 18S rRNAs (By similarity); Belongs to the eukaryotic ribosomal protein eS27 family. (84 aa)
Rpl38-ps360S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
Imp3IMP3, U3 small nucleolar ribonucleoprotein, homolog (Yeast). (184 aa)
Wdr12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
Rps340S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit (By similarity). Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA (By similarity). Displays high binding affinity for 7,8-dihydro-8- oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS) (By similarity). Has also been shown to bind with similar affinity to intact and damaged DNA (By similarity). S [...] (243 aa)
Rrp36Ribosomal RNA-processing 36. (244 aa)
NclNucleolin; Nucleolin is the major nucleolar protein of growing eukaryotic cells. It is found associated with intranucleolar chromatin and pre-ribosomal particles. It induces chromatin decondensation by binding to histone H1. It is thought to play a role in pre-rRNA transcription and ribosome assembly. May play a role in the process of transcriptional elongation. Binds RNA oligonucleotides with 5'-UUAGGG- 3' repeats more tightly than the telomeric single-stranded DNA 5'- TTAGGG-3' repeats (By similarity). (714 aa)
Bop1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (731 aa)
Exosc6Exosome component 6. (272 aa)
Rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
Rpp25Ribonuclease P protein subunit p25; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences; Belongs to the histone-like Alba family. (199 aa)
Rpp30Ribonuclease P/MRP subunit p30. (268 aa)
Rpl18a60S ribosomal protein L18a. (176 aa)
FblrRNA 2'-O-methyltransferase fibrillarin; S-adenosyl-L-methionine-dependent methyltransferase that has the ability to methylate both RNAs and proteins. Involved in pre-rRNA processing by catalyzing the site-specific 2'-hydroxyl methylation of ribose moieties in pre-ribosomal RNA (By similarity). Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (By similarity). Also acts as a protein methyltransferase by mediating methylation of 'Gln-105' of histone [...] (327 aa)
Pelp1Proline-, glutamic acid- and leucine-rich protein 1; Coactivator of estrogen receptor-mediated transcription and a corepressor of other nuclear hormone receptors and sequence-specific transcription factors. Plays a role in estrogen receptor (ER) genomic activity when present in the nuclear compartment by activating the ER target genes in a hormonal stimulation dependent manner. Can facilitate ER non-genomic signaling via SRC and PI3K interaction in the cytosol. Plays a role in E2-mediated cell cycle progression by interacting with RB1. May have important functional implications in ER/g [...] (1177 aa)
Rps540S ribosomal protein S5, N-terminally processed; Belongs to the universal ribosomal protein uS7 family. (204 aa)
Rps1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
Wdr3WD repeat domain 3 (Predicted), isoform CRA_c. (942 aa)
Uba52Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] (128 aa)
Rps1940S ribosomal protein S19; Required for pre-rRNA processing and maturation of 40S ribosomal subunits; Belongs to the eukaryotic ribosomal protein eS19 family. (145 aa)
Pdcd11Programmed cell death 11. (1876 aa)
Utp4Cirrhosis, autosomal recessive 1A (Human). (686 aa)
Nip760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly. (180 aa)
Rpl13a60S ribosomal protein L13a; Associated with ribosomes but is not required for canonical ribosome function and has extra-ribosomal functions Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma activation and subsequent phosphorylation dissociates from the ribosome and assembles into the GAIT complex which binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppres [...] (203 aa)
Exosc5Exosome component 5. (235 aa)
Rpl2760S ribosomal protein L27; Component of the large ribosomal subunit (By similarity). Required for proper rRNA processing and maturation of 28S and 5.8S rRNAs (By similarity). (136 aa)
Rpl1860S ribosomal protein L18; Component of the large ribosomal subunit. (189 aa)
Dis3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1025 aa)
Rpl3160S ribosomal protein L31; Belongs to the eukaryotic ribosomal protein eL31 family. (125 aa)
Nob1RNA-binding protein NOB1; May play a role in mRNA degradation (By similarity). Endonuclease required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits (By similarity). (410 aa)
Rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
Rrp7aSimilar to CGI-96 protein; gastric cancer antigen Zg14. (280 aa)
Wdr43WD repeat domain 43. (674 aa)
Riok3Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (519 aa)
Rps1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
Gnl3Guanine nucleotide-binding protein-like 3; May be required to maintain the proliferative capacity of stem cells. Stabilizes MDM2 by preventing its ubiquitination, and hence proteasomal degradation (By similarity). (538 aa)
Rpl560S ribosomal protein L5; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (297 aa)
Rps1340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
Mphosph10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (676 aa)
Rpl660S ribosomal protein L6; Component of the large ribosomal subunit. (298 aa)
LOC10091157560S acidic ribosomal protein P2; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
Dhx37DEAH-box helicase 37. (1150 aa)
LOC10036078160S ribosomal protein L37; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (97 aa)
Rpl17-260S ribosomal protein L17; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL22 family. (177 aa)
Rpl39lRibosomal protein L39-like. (51 aa)
Rpl10lRibosomal protein L10-like. (214 aa)
LOC10369082160S ribosomal protein L39; Belongs to the eukaryotic ribosomal protein eL39 family. (51 aa)
LOC10255545360S ribosomal protein L12; Binds directly to 26S ribosomal RNA. (165 aa)
LOC10036044960S ribosomal protein L9; Belongs to the universal ribosomal protein uL6 family. (192 aa)
D4A771_RATUncharacterized protein. (110 aa)
RGD1566373Similar to large subunit ribosomal protein L36a. (106 aa)
Rps21-240S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
RGD1564606Similar to 60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (156 aa)
Rps10l140S ribosomal protein S10; Component of the 40S ribosomal subunit. (165 aa)
Rps4x40S ribosomal protein S4, X isoform; Belongs to the eukaryotic ribosomal protein eS4 family. (290 aa)
Rcl1RNA terminal phosphate cyclase-like 1. (447 aa)
D3ZZ95_RAT60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
D4AD70_RATUncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
D3ZPN7_RATUncharacterized protein. (160 aa)
LOC10036011760S ribosomal protein L8; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL2 family. (257 aa)
D4A6B9_RATRibosomal_L7Ae domain-containing protein. (266 aa)
Rps18l140S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA; Belongs to the universal ribosomal protein uS13 family. (152 aa)
Bud23BUD23, rRNA methyltransferase and ribosome maturation factor. (281 aa)
Rpl36al60S ribosomal protein L36a. (106 aa)
D3ZDE0_RATUncharacterized protein. (106 aa)
LOC10036346940S ribosomal protein S24; Required for processing of pre-rRNA and maturation of 40S ribosomal subunits; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
Rpl31l4Uncharacterized protein. (125 aa)
Rps4y240S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
Rpl6-ps160S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (298 aa)
Utp14aUTP14A small subunit processome component. (803 aa)
Noc4lNucleolar complex protein 4 homolog. (516 aa)
D3ZJD3_RATRibosomal_L28e domain-containing protein. (137 aa)
Rpl3060S ribosomal protein L30; Belongs to the eukaryotic ribosomal protein eL30 family. (115 aa)
Rpp38Ribonuclease P/MRP 38 subunit (Human). (272 aa)
D4A4W9_RATUncharacterized protein. (117 aa)
Rpl2860S ribosomal protein L28; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL28 family. (137 aa)
Rps1440S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
MtrexMtr4 exosome RNA helicase. (1066 aa)
rCG_34378RCG34378, isoform CRA_h; Belongs to the universal ribosomal protein uS5 family. (267 aa)
D4A1Z2_RATKOW domain-containing protein. (145 aa)
Rpp14Ribonuclease P/MRP subunit p14. (122 aa)
Rpl3660S ribosomal protein L36; Component of the large ribosomal subunit. (105 aa)
Krr1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (380 aa)
Nol6Nucleolar protein 6. (299 aa)
Rps2840S ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family. (69 aa)
Rpl360S ribosomal protein L3; The L3 protein is a component of the large subunit of cytoplasmic ribosomes. (403 aa)
Rps1140S ribosomal protein S11. (158 aa)
Imp4U3 small nucleolar ribonucleoprotein protein IMP4; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing (By similarity). (291 aa)
Rpp40Ribonuclease P protein subunit p40; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (363 aa)
Ddx21Nucleolar RNA helicase 2; RNA helicase that acts as a sensor of the transcriptional status of both RNA polymerase (Pol) I and II: promotes ribosomal RNA (rRNA) processing and transcription from polymerase II (Pol II). Binds various RNAs, such as rRNAs, snoRNAs, 7SK and, at lower extent, mRNAs. In the nucleolus, localizes to rDNA locus, where it directly binds rRNAs and snoRNAs, and promotes rRNA transcription, processing and modification. Required for rRNA 2'-O-methylation, possibly by promoting the recruitment of late-acting snoRNAs SNORD56 and SNORD58 with pre- ribosomal complexes. I [...] (782 aa)
Heatr1HEAT repeat-containing protein 1. (2143 aa)
RGD156163540S ribosomal protein S17; Belongs to the eukaryotic ribosomal protein eS17 family. (135 aa)
RGD156461760S ribosomal protein L36a-like. (105 aa)
Ebna1bp2EBNA1-binding protein 2. (307 aa)
LOC10035995140S ribosomal protein S20. (119 aa)
LOC688637WD repeat domain 36. (897 aa)
Exosc1RCG57589, isoform CRA_a. (195 aa)
ByslBystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. (436 aa)
Mphosph6M phase phosphoprotein 6. (161 aa)
Exosc7Exosome component 7. (291 aa)
Rpl1060S ribosomal protein L10; Component of the large ribosomal subunit. Plays a role in the formation of actively translating ribosomes. May play a role in the embryonic brain development. (214 aa)
Rps27l40S ribosomal protein S27-like; Belongs to the eukaryotic ribosomal protein eS27 family. (84 aa)
Rpl12-ps1Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
Rpl2660S ribosomal protein L26. (145 aa)
Nop14Similar to 2610033H07Rik protein (Predicted), isoform CRA_b. (862 aa)
Nol11Nucleolar protein 11. (717 aa)
Rpl1160S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (188 aa)
Rpl1460S ribosomal protein L14; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL14 family. (219 aa)
Exosc8Exosome component 8. (243 aa)
UbcUbiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] (810 aa)
Rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
Rps940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
Wdr75WD repeat domain 75, isoform CRA_a. (829 aa)
Rps15a40S ribosomal protein S15a; Structural component of the ribosome. Required for proper erythropoiesis; Belongs to the universal ribosomal protein uS8 family. (130 aa)
Rps740S ribosomal protein S7; Required for rRNA maturation. (194 aa)
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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