STRINGSTRING
RT1-Db1 RT1-Db1 RT1-Ba RT1-Ba RT1-Bb RT1-Bb RT1-DOb RT1-DOb RT1-M3-1 RT1-M3-1 RT1-N3 RT1-N3 RT1-S3 RT1-S3 LOC103694380 LOC103694380 Cd80 Cd80 Cd86 Cd86 Faslg Faslg Il1b Il1b Ifng Ifng Cd28 Cd28 Il6 Il6 Il2 Il2 Fas Fas RT1-M4 RT1-M4 Kir3dl1 Kir3dl1 RT1-Ha RT1-Ha RT1-DOa RT1-DOa RT1-CE10 RT1-CE10 Gzmb Gzmb RT1-CE1 RT1-CE1 RT1-Db2 RT1-Db2 RT1-T24-4 RT1-T24-4 RT1-M2 RT1-M2 RT1-M5 RT1-M5 RT1-M6-2 RT1-M6-2 RT1-Da RT1-Da RT1-CE3 RT1-CE3 RT1-N2 RT1-N2 RT1-T24-1 RT1-T24-1 RT1-A2 RT1-A2 RT1-CE15 RT1-CE15 RT1-CE5 RT1-CE5 LOC688340 LOC688340 RT1-DMb RT1-DMb RT1-DMa RT1-DMa Klrc1 Klrc1 Il1a Il1a RT1-A RT1-A RT1-T24-3 RT1-T24-3 RT1-CE12 RT1-CE12 Klrd1 Klrd1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RT1-Db1Rano class II histocompatibility antigen, D-1 beta chain; Involved in the presentation of foreign antigens to the immune system; Belongs to the MHC class II family. (264 aa)
RT1-BaRano class II histocompatibility antigen, B alpha chain. (255 aa)
RT1-BbRano class II histocompatibility antigen, B-1 beta chain; Involved in the presentation of foreign antigens to the immune system; Belongs to the MHC class II family. (263 aa)
RT1-DObRT1 class II, locus DOb. (272 aa)
RT1-M3-1RT1 class Ib, locus M3, isoform CRA_a; Belongs to the MHC class I family. (339 aa)
RT1-N3RT1 class Ib gene, H2-TL-like, grc region (N3); Belongs to the MHC class I family. (393 aa)
RT1-S3RT1 class Ib, locus S3; Belongs to the MHC class I family. (365 aa)
LOC103694380Tumor necrosis factor, membrane form; Cytokine that binds to TNFRSF1A/TNFR1 and TNFRSF1B/TNFBR. It is mainly secreted by macrophages and can induce cell death of certain tumor cell lines. It is potent pyrogen causing fever by direct action or by stimulation of interleukin-1 secretion and is implicated in the induction of cachexia, Under certain conditions it can stimulate cell proliferation and induce cell differentiation (By similarity). Induces insulin resistance in adipocytes via inhibition of insulin-induced IRS1 tyrosine phosphorylation and insulin-induced glucose uptake. Induces [...] (235 aa)
Cd80CD80 antigen, isoform CRA_a. (321 aa)
Cd86Cd86 antigen, isoform CRA_c. (313 aa)
FaslgTumor necrosis factor ligand superfamily member 6, membrane form; Cytokine that binds to TNFRSF6/FAS, a receptor that transduces the apoptotic signal into cells. Involved in cytotoxic T-cell-mediated apoptosis, natural killer cell-mediated apoptosis and in T-cell development. Initiates fratricidal/suicidal activation-induced cell death (AICD) in antigen- activated T-cells contributing to the termination of immune responses (By similarity). TNFRSF6/FAS-mediated apoptosis has also a role in the induction of peripheral tolerance (By similarity). Binds to TNFRSF6B/DcR3, a decoy receptor th [...] (278 aa)
Il1bInterleukin-1 beta; Potent proinflammatory cytokine. Initially discovered as the major endogenous pyrogen, induces prostaglandin synthesis, neutrophil influx and activation, T-cell activation and cytokine production, B- cell activation and antibody production, and fibroblast proliferation and collagen production. Promotes Th17 differentiation of T-cells. Synergizes with IL12/interleukin-12 to induce IFNG synthesis from T- helper 1 (Th1) cells. (268 aa)
IfngInterferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. (156 aa)
Cd28T-cell-specific surface glycoprotein CD28; Involved in T-cell activation, the induction of cell proliferation and cytokine production and promotion of T-cell survival. Enhances the production of IL4 and IL10 in T-cells in conjunction with TCR/CD3 ligation and CD40L costimulation. (218 aa)
Il6Interleukin-6; Cytokine with a wide variety of biological functions. It is a potent inducer of the acute phase response. Plays an essential role in the final differentiation of B-cells into Ig-secreting cells Involved in lymphocyte and monocyte differentiation. Acts on B-cells, T-cells, hepatocytes, hematopoietic progenitor cells and cells of the CNS. Required for the generation of T(H)17 cells. Also acts as a myokine. It is discharged into the bloodstream after muscle contraction and acts to increase the breakdown of fats and to improve insulin resistance. It induces myeloma and plasm [...] (211 aa)
Il2Interleukin-2; Produced by T-cells in response to antigenic or mitogenic stimulation, this protein is required for T-cell proliferation and other activities crucial to regulation of the immune response. Can stimulate B-cells, monocytes, lymphokine-activated killer cells, natural killer cells, and glioma cells; Belongs to the IL-2 family. (155 aa)
FasTumor necrosis factor receptor superfamily member 6; Receptor for TNFSF6/FASLG. The adapter molecule FADD recruits caspase-8 to the activated receptor. The resulting death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation which initiates the subsequent cascade of caspases (aspartate-specific cysteine proteases) mediating apoptosis. FAS-mediated apoptosis may have a role in the induction of peripheral tolerance, in the antigen- stimulated suicide of mature T-cells, or both (By similarity). (324 aa)
RT1-M4RT1 class Ib, locus M4; Belongs to the MHC class I family. (341 aa)
Kir3dl1Killer cell immunoglobulin-like receptor 3DL1; Receptor on natural killer (NK) cells. Inhibits the activity of NK cells thus preventing cell lysis; Belongs to the immunoglobulin superfamily. (422 aa)
RT1-HaRT1 class II, locus Ha; Belongs to the MHC class II family. (216 aa)
RT1-DOaRT1 class II, locus DOa; Belongs to the MHC class II family. (250 aa)
RT1-CE10RT1 class I, locus CE10; Belongs to the MHC class I family. (367 aa)
GzmbGranzyme B; This enzyme is necessary for target cell lysis in cell- mediated immune responses. It cleaves after Asp. Seems to be linked to an activation cascade of caspases (aspartate-specific cysteine proteases) responsible for apoptosis execution. Cleaves caspase-3, -7, -9 and 10 to give rise to active enzymes mediating apoptosis (By similarity); Belongs to the peptidase S1 family. Granzyme subfamily. (248 aa)
RT1-CE1RT1 class I, locus1; Belongs to the MHC class I family. (375 aa)
RT1-Db2MHC class II beta chain. (287 aa)
RT1-T24-4Histocompatibility 2, T region locus 24; Belongs to the MHC class I family. (373 aa)
RT1-M2RT1 class Ib, locus M2; Belongs to the MHC class I family. (344 aa)
RT1-M5RT1 class Ib, locus M5; Belongs to the MHC class I family. (357 aa)
RT1-M6-2RT1 class I, locus M6, gene 2; Belongs to the MHC class I family. (332 aa)
RT1-DaHistocompatibility 2, class II antigen E alpha; Belongs to the MHC class II family. (255 aa)
RT1-CE3RT1 class I, locus CE3; Belongs to the MHC class I family. (352 aa)
RT1-N2RCG41803, isoform CRA_a; Belongs to the MHC class I family. (377 aa)
RT1-T24-1RT1 class I, locus T24, gene 1; Belongs to the MHC class I family. (330 aa)
RT1-A2RT1 class I histocompatibility antigen, AA alpha chain; Involved in the presentation of foreign antigens to the immune system. (366 aa)
RT1-CE15RT1 class I, locus CE11-like; Belongs to the MHC class I family. (353 aa)
RT1-CE5RT1 class I, locus CE5; Belongs to the MHC class I family. (375 aa)
LOC688340T-cell receptor alpha chain V region PHDS58-like. (113 aa)
RT1-DMbMajor histocompatibility complex, class II, DM beta, isoform CRA_a. (261 aa)
RT1-DMaMajor histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family. (260 aa)
Klrc1Killer cell lectin-like receptor C1. (234 aa)
Il1aInterleukin-1 alpha; Produced by activated macrophages, IL-1 stimulates thymocyte proliferation by inducing IL-2 release, B-cell maturation and proliferation, and fibroblast growth factor activity. IL-1 proteins are involved in the inflammatory response, being identified as endogenous pyrogens, and are reported to stimulate the release of prostaglandin and collagenase from synovial cells. (268 aa)
RT1-ART1 class Ia, locus A1; Belongs to the MHC class I family. (382 aa)
RT1-T24-3RT1 class I, locus T24, gene 3; Belongs to the MHC class I family. (316 aa)
RT1-CE12Ig-like domain-containing protein; Belongs to the MHC class I family. (371 aa)
Klrd1Natural killer cells antigen CD94; Plays a role as a receptor for the recognition of MHC class I HLA-E molecules by NK cells and some cytotoxic T-cells. (179 aa)
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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