5 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H0V4A5_CAVPO	Uncharacterized protein. (830 aa)
	TRIM33	Tripartite motif containing 33. (1128 aa)
	TRIM24	Tripartite motif containing 24. (1002 aa)
	SMARCAD1	Uncharacterized protein. (1032 aa)
	Znf10	Uncharacterized protein. (571 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H0V4A5_CAVPO	SMARCAD1	ENSCPOP00000004442	ENSCPOP00000010245	Uncharacterized protein.	Uncharacterized protein.	0.937
H0V4A5_CAVPO	TRIM24	ENSCPOP00000004442	ENSCPOP00000010171	Uncharacterized protein.	Tripartite motif containing 24.	0.751
H0V4A5_CAVPO	TRIM33	ENSCPOP00000004442	ENSCPOP00000009104	Uncharacterized protein.	Tripartite motif containing 33.	0.658
H0V4A5_CAVPO	Znf10	ENSCPOP00000004442	ENSCPOP00000026121	Uncharacterized protein.	Uncharacterized protein.	0.876
SMARCAD1	H0V4A5_CAVPO	ENSCPOP00000010245	ENSCPOP00000004442	Uncharacterized protein.	Uncharacterized protein.	0.937
SMARCAD1	TRIM24	ENSCPOP00000010245	ENSCPOP00000010171	Uncharacterized protein.	Tripartite motif containing 24.	0.717
SMARCAD1	TRIM33	ENSCPOP00000010245	ENSCPOP00000009104	Uncharacterized protein.	Tripartite motif containing 33.	0.780
TRIM24	H0V4A5_CAVPO	ENSCPOP00000010171	ENSCPOP00000004442	Tripartite motif containing 24.	Uncharacterized protein.	0.751
TRIM24	SMARCAD1	ENSCPOP00000010171	ENSCPOP00000010245	Tripartite motif containing 24.	Uncharacterized protein.	0.717
TRIM24	TRIM33	ENSCPOP00000010171	ENSCPOP00000009104	Tripartite motif containing 24.	Tripartite motif containing 33.	0.876
TRIM24	Znf10	ENSCPOP00000010171	ENSCPOP00000026121	Tripartite motif containing 24.	Uncharacterized protein.	0.687
TRIM33	H0V4A5_CAVPO	ENSCPOP00000009104	ENSCPOP00000004442	Tripartite motif containing 33.	Uncharacterized protein.	0.658
TRIM33	SMARCAD1	ENSCPOP00000009104	ENSCPOP00000010245	Tripartite motif containing 33.	Uncharacterized protein.	0.780
TRIM33	TRIM24	ENSCPOP00000009104	ENSCPOP00000010171	Tripartite motif containing 33.	Tripartite motif containing 24.	0.876
TRIM33	Znf10	ENSCPOP00000009104	ENSCPOP00000026121	Tripartite motif containing 33.	Uncharacterized protein.	0.744
Znf10	H0V4A5_CAVPO	ENSCPOP00000026121	ENSCPOP00000004442	Uncharacterized protein.	Uncharacterized protein.	0.876
Znf10	TRIM24	ENSCPOP00000026121	ENSCPOP00000010171	Uncharacterized protein.	Tripartite motif containing 24.	0.687
Znf10	TRIM33	ENSCPOP00000026121	ENSCPOP00000009104	Uncharacterized protein.	Tripartite motif containing 33.	0.744