STRINGSTRING
CNOT6 CNOT6 LRRC27 LRRC27 MLH1 MLH1 CNOT2 CNOT2 SAMD4B SAMD4B CNOT6L CNOT6L SAMD4A SAMD4A PAN2 PAN2 PNLDC1 PNLDC1 PARN PARN CNOT7 CNOT7 CNOT3 CNOT3 PAN3 PAN3 ZFP36 ZFP36
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNOT6CCR4-NOT transcription complex subunit 6. (534 aa)
LRRC27Leucine rich repeat containing 27. (508 aa)
MLH1MutL homolog 1. (758 aa)
CNOT2CCR4-NOT transcription complex subunit 2. (544 aa)
SAMD4BSterile alpha motif domain containing 4B. (692 aa)
CNOT6LCCR4-NOT transcription complex subunit 6 like. (462 aa)
SAMD4ASterile alpha motif domain containing 4A. (714 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1204 aa)
PNLDC1PARN like, ribonuclease domain containing 1. (518 aa)
PARNPoly(A)-specific ribonuclease. (637 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (285 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (751 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (751 aa)
ZFP36ZFP36 ring finger protein. (313 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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