STRINGSTRING
Hnrnpa3 Hnrnpa3 RC3H1 RC3H1 EXOSC8 EXOSC8 H0V4H8_CAVPO H0V4H8_CAVPO TXNDC11 TXNDC11 KHSRP KHSRP IGF2BP2 IGF2BP2 CRYZ CRYZ DDX5 DDX5 DAZL DAZL HNRNPL HNRNPL DHX36 DHX36 DND1 DND1 LARP4B LARP4B YBX2 YBX2 RPS7 RPS7 LOC101788648 LOC101788648 ZC3H12A ZC3H12A H0VIV8_CAVPO H0VIV8_CAVPO YBX3 YBX3 CPSF1 CPSF1 ELAVL1 ELAVL1 HNRNPU HNRNPU RBMS1 RBMS1 CELF2 CELF2 RBM38 RBM38 RNF20 RNF20 RBM4 RBM4 PCBP1 PCBP1 PABPC1L PABPC1L ILF3 ILF3 SECISBP2 SECISBP2 Tut1 Tut1 PCBP4 PCBP4 IGF2BP3 IGF2BP3 CPEB4 CPEB4 IGF2BP1 IGF2BP1 CIRBP CIRBP PABPC4L PABPC4L ENSCPOP00000029614 ENSCPOP00000029614 ENSCPOP00000029646 ENSCPOP00000029646 TP53 TP53 TARDBP TARDBP ENSCPOP00000029845 ENSCPOP00000029845 ENSCPOP00000029900 ENSCPOP00000029900 CPEB3 CPEB3 HNRNPR HNRNPR PABPC3 PABPC3 ENSCPOP00000031782 ENSCPOP00000031782 CARHSP1 CARHSP1 Hnrnpa1 Hnrnpa1 PABPC5 PABPC5 LARP4 LARP4 SERBP1 SERBP1 H0W1V8_CAVPO H0W1V8_CAVPO ZFP36L2 ZFP36L2 Cpeb1 Cpeb1 EXOSC4 EXOSC4 RBM44 RBM44 FXR2 FXR2 LOC100732533 LOC100732533 HNRNPA0 HNRNPA0 ZNF385A ZNF385A PUM2 PUM2 RBMS2 RBMS2 RBM24 RBM24 BOLL BOLL UTP23 UTP23 PUM1 PUM1 RBMS3 RBMS3 RBFOX1 RBFOX1 Elavl4 Elavl4 FXR1 FXR1 EXOSC9 EXOSC9 ZFP36 ZFP36 PABPC4 PABPC4 DAZAP1 DAZAP1 RNPS1 RNPS1 HNRNPD HNRNPD RPL5 RPL5 LOC100726317 LOC100726317 SYNCRIP SYNCRIP NUDT21 NUDT21 HNRNPA2B1 HNRNPA2B1 CSDC2 CSDC2 CELF1 CELF1 TIA1 TIA1 ZFP36L1 ZFP36L1 FUS FUS Lrpprc Lrpprc CPEB2 CPEB2 ELAVL3 ELAVL3 CCT5 CCT5 BTG4 BTG4 RNF40 RNF40 LARP1 LARP1 SECISBP2L SECISBP2L GEMIN5 GEMIN5 FMR1 FMR1 ANGEL2 ANGEL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hnrnpa3Uncharacterized protein. (368 aa)
RC3H1Ring finger and CCCH-type domains 1. (1116 aa)
EXOSC8Exosome component 8. (276 aa)
H0V4H8_CAVPOKH domain-containing protein. (145 aa)
TXNDC11Thioredoxin domain containing 11. (948 aa)
KHSRPKH-type splicing regulatory protein. (726 aa)
IGF2BP2Insulin like growth factor 2 mRNA binding protein 2. (539 aa)
CRYZQuinone oxidoreductase; Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding. (329 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (614 aa)
DAZLDeleted in azoospermia like. (295 aa)
HNRNPLHeterogeneous nuclear ribonucleoprotein L. (586 aa)
DHX36DEAH-box helicase 36. (916 aa)
DND1DND microRNA-mediated repression inhibitor 1. (353 aa)
LARP4BLa ribonucleoprotein domain family member 4B. (738 aa)
YBX2Y-box binding protein 2. (359 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
LOC101788648Uncharacterized protein. (485 aa)
ZC3H12AZinc finger CCCH-type containing 12A. (550 aa)
H0VIV8_CAVPOUncharacterized protein. (372 aa)
YBX3Y-box binding protein 3. (339 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1429 aa)
ELAVL1ELAV like RNA binding protein 1. (295 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (822 aa)
RBMS1RNA binding motif single stranded interacting protein 1. (404 aa)
CELF2CUGBP Elav-like family member 2. (526 aa)
RBM38RNA binding motif protein 38. (247 aa)
RNF20E3 ubiquitin protein ligase; Belongs to the BRE1 family. (976 aa)
RBM4RNA binding motif protein 4. (365 aa)
PCBP1Poly(rC) binding protein 1. (356 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (618 aa)
ILF3Interleukin enhancer binding factor 3. (895 aa)
SECISBP2SECIS binding protein 2. (854 aa)
Tut1RRM domain-containing protein. (852 aa)
PCBP4Poly(rC) binding protein 4. (403 aa)
IGF2BP3Insulin like growth factor 2 mRNA binding protein 3. (519 aa)
CPEB4Cytoplasmic polyadenylation element binding protein 4. (636 aa)
IGF2BP1Insulin like growth factor 2 mRNA binding protein 1. (547 aa)
CIRBPCold inducible RNA binding protein. (173 aa)
PABPC4LPoly(A) binding protein cytoplasmic 4 like. (359 aa)
ENSCPOP00000029614Uncharacterized protein. (55 aa)
ENSCPOP00000029646RRM domain-containing protein. (236 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (423 aa)
TARDBPTAR DNA binding protein. (413 aa)
ENSCPOP00000029845Uncharacterized protein. (364 aa)
ENSCPOP00000029900Uncharacterized protein. (195 aa)
CPEB3Cytoplasmic polyadenylation element binding protein 3. (588 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (633 aa)
PABPC3Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (586 aa)
ENSCPOP00000031782Uncharacterized protein. (133 aa)
CARHSP1Calcium regulated heat stable protein 1. (149 aa)
Hnrnpa1RRM domain-containing protein. (324 aa)
PABPC5Poly(A) binding protein cytoplasmic 5. (382 aa)
LARP4La ribonucleoprotein domain family member 4. (693 aa)
SERBP1SERPINE1 mRNA binding protein 1. (395 aa)
H0W1V8_CAVPOUncharacterized protein. (319 aa)
ZFP36L2ZFP36 ring finger protein like 2. (403 aa)
Cpeb1RRM domain-containing protein. (560 aa)
EXOSC4Exosome component 4. (245 aa)
RBM44RNA binding motif protein 44. (999 aa)
FXR2FMR1 autosomal homolog 2. (672 aa)
LOC100732533Uncharacterized protein. (311 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (301 aa)
ZNF385AZinc finger protein 385A. (386 aa)
PUM2Pumilio RNA binding family member 2. (1068 aa)
RBMS2RNA binding motif single stranded interacting protein 2. (407 aa)
RBM24RNA binding motif protein 24. (236 aa)
BOLLBoule homolog, RNA binding protein. (322 aa)
UTP23UTP23 small subunit processome component. (270 aa)
PUM1Pumilio RNA binding family member 1. (1189 aa)
RBMS3RNA binding motif single stranded interacting protein 3. (464 aa)
RBFOX1RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (418 aa)
Elavl4ELAV-like protein; Belongs to the RRM elav family. (385 aa)
FXR1FMR1 autosomal homolog 1. (677 aa)
EXOSC9Exosome component 9. (439 aa)
ZFP36ZFP36 ring finger protein. (313 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
DAZAP1DAZ associated protein 1. (400 aa)
RNPS1RNA binding protein with serine rich domain 1. (305 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (313 aa)
RPL5Ribosomal_L18_c domain-containing protein. (297 aa)
LOC100726317Uncharacterized protein. (421 aa)
SYNCRIPSynaptotagmin binding cytoplasmic RNA interacting protein. (562 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (223 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (369 aa)
CSDC2Cold shock domain containing C2. (153 aa)
CELF1CUGBP Elav-like family member 1. (487 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (398 aa)
ZFP36L1ZFP36 ring finger protein like 1. (338 aa)
FUSFUS RNA binding protein. (490 aa)
LrpprcPPR_long domain-containing protein. (1203 aa)
CPEB2Cytoplasmic polyadenylation element binding protein 2. (564 aa)
ELAVL3ELAV-like protein; Belongs to the RRM elav family. (308 aa)
CCT5Chaperonin containing TCP1 subunit 5. (541 aa)
BTG4BTG anti-proliferation factor 4. (230 aa)
RNF40E3 ubiquitin protein ligase; Belongs to the BRE1 family. (1001 aa)
LARP1La ribonucleoprotein domain family member 1. (954 aa)
SECISBP2LSECIS binding protein 2 like. (1114 aa)
GEMIN5Gem nuclear organelle associated protein 5. (1554 aa)
FMR1Fragile X mental retardation 1. (612 aa)
ANGEL2Angel homolog 2. (544 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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