37 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GNAT3	G protein subunit alpha transducin 3. (354 aa)
	GNB5	G protein subunit beta 5. (406 aa)
	GNA13	G protein subunit alpha 13. (377 aa)
	Gnat2	Uncharacterized protein. (354 aa)
	GNG13	G protein subunit gamma 13. (67 aa)
	H0VE70_CAVPO	Uncharacterized protein. (796 aa)
	GNGT1	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (74 aa)
	GNAT1	Alpha-transducin. (350 aa)
	GNB1	Beta-transducin. (340 aa)
	Gna15	Uncharacterized protein. (205 aa)
	GNAL	G protein subunit alpha L. (372 aa)
	GNA12	G protein subunit alpha 12. (315 aa)
	GNA14	G protein subunit alpha 14. (356 aa)
	ENSCPOP00000031524	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (100 aa)
	LOC100732436	Uncharacterized protein. (327 aa)
	GNGT2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (69 aa)
	ENSCPOP00000030509	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (72 aa)
	GNAI1	Uncharacterized protein. (330 aa)
	GNG4	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (75 aa)
	GNG8	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (70 aa)
	GNAQ	G protein subunit alpha q. (313 aa)
	Gng5	G protein gamma domain-containing protein. (41 aa)
	GNG12	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (72 aa)
	GNB4	G protein subunit beta 4. (340 aa)
	GNG11	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
	GNAO1	G protein subunit alpha o1. (318 aa)
	GNG2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (71 aa)
	ENSCPOP00000023932	Uncharacterized protein. (332 aa)
	ENSCPOP00000023438	Uncharacterized protein. (283 aa)
	GNG7	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (69 aa)
	GNG3	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (75 aa)
	GNAZ	G protein subunit alpha z. (355 aa)
	LOC100732158	Uncharacterized protein. (246 aa)
	GNA11	G protein subunit alpha 11. (345 aa)
	H0WBW4_CAVPO	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (68 aa)
	GNB3	G protein subunit beta 3. (340 aa)
	GNB2	G protein subunit beta 2. (378 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCPOP00000023932	ENSCPOP00000030509	ENSCPOP00000023932	ENSCPOP00000030509	Uncharacterized protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.700
ENSCPOP00000023932	ENSCPOP00000031524	ENSCPOP00000023932	ENSCPOP00000031524	Uncharacterized protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.729
ENSCPOP00000023932	GNA11	ENSCPOP00000023932	ENSCPOP00000021515	Uncharacterized protein.	G protein subunit alpha 11.	0.456
ENSCPOP00000023932	GNA14	ENSCPOP00000023932	ENSCPOP00000004849	Uncharacterized protein.	G protein subunit alpha 14.	0.453
ENSCPOP00000023932	GNAI1	ENSCPOP00000023932	ENSCPOP00000030063	Uncharacterized protein.	Uncharacterized protein.	0.555
ENSCPOP00000023932	GNAL	ENSCPOP00000023932	ENSCPOP00000002727	Uncharacterized protein.	G protein subunit alpha L.	0.646
ENSCPOP00000023932	GNAO1	ENSCPOP00000023932	ENSCPOP00000024931	Uncharacterized protein.	G protein subunit alpha o1.	0.629
ENSCPOP00000023932	GNAQ	ENSCPOP00000023932	ENSCPOP00000026700	Uncharacterized protein.	G protein subunit alpha q.	0.451
ENSCPOP00000023932	GNAT1	ENSCPOP00000023932	ENSCPOP00000007345	Uncharacterized protein.	Alpha-transducin.	0.882
ENSCPOP00000023932	GNAT3	ENSCPOP00000023932	ENSCPOP00000014659	Uncharacterized protein.	G protein subunit alpha transducin 3.	0.631
ENSCPOP00000023932	GNB1	ENSCPOP00000023932	ENSCPOP00000004992	Uncharacterized protein.	Beta-transducin.	0.906
ENSCPOP00000023932	GNB2	ENSCPOP00000023932	ENSCPOP00000015981	Uncharacterized protein.	G protein subunit beta 2.	0.869
ENSCPOP00000023932	GNB3	ENSCPOP00000023932	ENSCPOP00000017308	Uncharacterized protein.	G protein subunit beta 3.	0.877
ENSCPOP00000023932	GNB4	ENSCPOP00000023932	ENSCPOP00000025331	Uncharacterized protein.	G protein subunit beta 4.	0.881
ENSCPOP00000023932	GNB5	ENSCPOP00000023932	ENSCPOP00000012180	Uncharacterized protein.	G protein subunit beta 5.	0.844
ENSCPOP00000023932	GNG11	ENSCPOP00000023932	ENSCPOP00000025130	Uncharacterized protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.854
ENSCPOP00000023932	GNG12	ENSCPOP00000023932	ENSCPOP00000026218	Uncharacterized protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.674
ENSCPOP00000023932	GNG13	ENSCPOP00000023932	ENSCPOP00000009083	Uncharacterized protein.	G protein subunit gamma 13.	0.791
ENSCPOP00000023932	GNG2	ENSCPOP00000023932	ENSCPOP00000024690	Uncharacterized protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.784
ENSCPOP00000023932	GNG3	ENSCPOP00000023932	ENSCPOP00000022414	Uncharacterized protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.712