STRINGSTRING
MFAP4 MFAP4 RUVBL2 RUVBL2 Il12a Il12a EGFR EGFR BAK1 BAK1 TIPIN TIPIN RO60 RO60 NEDD4 NEDD4 RHBDD1 RHBDD1 SIRT1 SIRT1 MSH6 MSH6 POLK POLK PPID PPID PML PML ERCC5 ERCC5 MEN1 MEN1 XPA XPA IL12B IL12B USP28 USP28 ERCC3 ERCC3 SMPD1 SMPD1 METTL3 METTL3 PRIMPOL PRIMPOL WRN WRN USF1 USF1 ERCC4 ERCC4 Ercc8 Ercc8 BRCA2 BRCA2 HYAL2 HYAL2 EP300 EP300 PRKAA1 PRKAA1 TP53I13 TP53I13 OPN5 OPN5 USP47 USP47 MMP1 MMP1 XPC XPC ATR ATR Pold3 Pold3 EI24 EI24 MMP9 MMP9 DHX36 DHX36 PIK3R1 PIK3R1 MME MME BRSK1 BRSK1 PCNA PCNA OPN1SW OPN1SW H0VGS2_CAVPO H0VGS2_CAVPO PBK PBK CCAR2 CCAR2 PTPRK PTPRK C10orf90 C10orf90 INO80 INO80 Aqp1 Aqp1 ACTR5 ACTR5 REV1 REV1 CASP9 CASP9 CAT CAT MAP4K3 MAP4K3 DDIAS DDIAS TIMP1 TIMP1 FECH FECH DDB2 DDB2 MAP3K4 MAP3K4 TMEM161A TMEM161A UVSSA UVSSA RAD18 RAD18 MSH2 MSH2 NFATC4 NFATC4 MAPK13 MAPK13 SDE2 SDE2 DTL DTL Parp1 Parp1 SPRTN SPRTN BCL3 BCL3 TREX1 TREX1 Chek1 Chek1 CIRBP CIRBP USP1 USP1 MAP2K7 MAP2K7 RELA RELA BCL2 BCL2 Yy1 Yy1 N4BP1 N4BP1 RNF168 RNF168 RHNO1 RHNO1 ERCC2 ERCC2 MYC MYC ENSCPOP00000025455 ENSCPOP00000025455 CUL4B CUL4B STK11 STK11 CDKN1A CDKN1A PRKCD PRKCD AKT1 AKT1 EIF2AK4 EIF2AK4 CCND1 CCND1 EIF2S1 EIF2S1 ENSCPOP00000027080 ENSCPOP00000027080 DDB1 DDB1 POLH POLH Crip1 Crip1 MC1R MC1R HMGN1 HMGN1 CDKN2D CDKN2D TRIM32 TRIM32 SDF4 SDF4 MAPK9 MAPK9 UBE2B UBE2B Gdf1 Gdf1 BRSK2 BRSK2 ENSCPOP00000024428 ENSCPOP00000024428 ENSCPOP00000029395 ENSCPOP00000029395 TP53 TP53 BMF BMF KDM1A KDM1A POLI POLI ERCC1 ERCC1 ERCC6 ERCC6 BAX BAX CREBBP CREBBP TRIAP1 TRIAP1 Pclaf Pclaf UACA UACA NOC2L NOC2L MAPK8 MAPK8 IMPACT IMPACT Pmaip1 Pmaip1 Cops9 Cops9 C9orf116 C9orf116 Ube2a Ube2a OPN3 OPN3 Dcun1d3 Dcun1d3 ZBTB1 ZBTB1 UBE4B UBE4B MMP3 MMP3 Bivm Bivm TP53INP1 TP53INP1 MDM2 MDM2 POLD1 POLD1 HYAL3 HYAL3 MMP2 MMP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MFAP4Microfibril associated protein 4. (257 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (486 aa)
Il12aInterleukin-12 subunit alpha; Cytokine that can act as a growth factor for activated T and NK cells, enhance the lytic activity of NK/lymphokine-activated Killer cells, and stimulate the production of IFN-gamma by resting PBMC. (221 aa)
EGFRReceptor protein-tyrosine kinase. (1214 aa)
BAK1BCL2 antagonist/killer 1. (214 aa)
TIPINTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (249 aa)
RO60Ro60, Y RNA binding protein. (516 aa)
NEDD4E3 ubiquitin-protein ligase. (896 aa)
RHBDD1Rhomboid domain containing 1. (309 aa)
SIRT1Sirtuin 1. (717 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1336 aa)
POLKDNA polymerase kappa. (540 aa)
PPIDPeptidylprolyl isomerase D. (370 aa)
PMLPromyelocytic leukemia. (849 aa)
ERCC5ERCC excision repair 5, endonuclease. (1059 aa)
MEN1Menin 1. (615 aa)
XPAXPA, DNA damage recognition and repair factor. (263 aa)
IL12BInterleukin-12 subunit beta; Cytokine that can act as a growth factor for activated T and NK cells, enhance the lytic activity of NK/lymphokine-activated killer cells, and stimulate the production of IFN-gamma by resting PBMC. Belongs to the IL-12B family. (332 aa)
USP28Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family. (1051 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (781 aa)
SMPD1Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (627 aa)
METTL3Methyltransferase like 3; Belongs to the MT-A70-like family. (553 aa)
PRIMPOLPrimase and DNA directed polymerase. (547 aa)
WRNWRN RecQ like helicase. (1462 aa)
USF1Upstream transcription factor 1. (310 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (916 aa)
Ercc8WD_REPEATS_REGION domain-containing protein. (396 aa)
BRCA2BRCA2 DNA repair associated. (3151 aa)
HYAL2Hyaluronidase. (471 aa)
EP300E1A binding protein p300. (2425 aa)
PRKAA1Non-specific serine/threonine protein kinase. (559 aa)
TP53I13Tumor protein p53 inducible protein 13. (385 aa)
OPN5Opsin 5; Belongs to the G-protein coupled receptor 1 family. (333 aa)
USP47Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. (1375 aa)
MMP1Matrix metallopeptidase 1. (472 aa)
XPCXPC complex subunit, DNA damage recognition and repair factor. (923 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2539 aa)
Pold3Uncharacterized protein. (466 aa)
EI24EI24 autophagy associated transmembrane protein. (349 aa)
MMP9Matrix metallopeptidase 9. (715 aa)
DHX36DEAH-box helicase 36. (916 aa)
PIK3R1Phosphoinositide-3-kinase regulatory subunit 1. (724 aa)
MMEMembrane metalloendopeptidase. (718 aa)
BRSK1BR serine/threonine kinase 1. (763 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
OPN1SWG_PROTEIN_RECEP_F1_2 domain-containing protein. (346 aa)
H0VGS2_CAVPOUncharacterized protein. (611 aa)
PBKPDZ binding kinase. (324 aa)
CCAR2Cell cycle and apoptosis regulator 2. (924 aa)
PTPRKProtein tyrosine phosphatase receptor type K. (1455 aa)
C10orf90Chromosome 10 open reading frame 90. (700 aa)
INO80INO80 complex ATPase subunit. (1558 aa)
Aqp1Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
ACTR5Actin related protein 5; Belongs to the actin family. (602 aa)
REV1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1251 aa)
CASP9Caspase 9; Belongs to the peptidase C14A family. (447 aa)
CATCatalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells; Belongs to the catalase family. (527 aa)
MAP4K3Mitogen-activated protein kinase kinase kinase kinase 3; May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. (894 aa)
DDIASDNA damage induced apoptosis suppressor. (897 aa)
TIMP1TIMP metallopeptidase inhibitor 1. (207 aa)
FECHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (424 aa)
DDB2Damage specific DNA binding protein 2. (289 aa)
MAP3K4Mitogen-activated protein kinase kinase kinase 4. (1601 aa)
TMEM161ATransmembrane protein 161A. (474 aa)
UVSSAUV stimulated scaffold protein A. (730 aa)
RAD18RAD18 E3 ubiquitin protein ligase. (493 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (934 aa)
NFATC4Nuclear factor of activated T cells 4. (901 aa)
MAPK13Mitogen-activated protein kinase. (366 aa)
SDE2SDE2 telomere maintenance homolog. (453 aa)
DTLDenticleless E3 ubiquitin protein ligase homolog. (734 aa)
Parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1011 aa)
SPRTNSprT-like N-terminal domain. (481 aa)
BCL3BCL3 transcription coactivator. (424 aa)
TREX1Three prime repair exonuclease 1. (314 aa)
Chek1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (439 aa)
CIRBPCold inducible RNA binding protein. (173 aa)
USP1Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (764 aa)
MAP2K7Mitogen-activated protein kinase kinase 7. (459 aa)
RELARELA proto-oncogene, NF-kB subunit. (549 aa)
BCL2BCL2 apoptosis regulator. (183 aa)
Yy1Uncharacterized protein. (195 aa)
N4BP1NEDD4 binding protein 1. (886 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (573 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (233 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (760 aa)
MYCMyc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (438 aa)
ENSCPOP00000025455Protein kinase domain-containing protein. (360 aa)
CUL4BCullin 4B; Belongs to the cullin family. (936 aa)
STK11Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (435 aa)
CDKN1ACyclin dependent kinase inhibitor 1A. (169 aa)
PRKCDProtein kinase C delta type; Calcium-independent, phospholipid- and diacylglycerol (DAG)- dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti- apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (675 aa)
AKT1Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
EIF2AK4Eukaryotic translation initiation factor 2 alpha kinase 4. (1651 aa)
CCND1Cyclin D1; Belongs to the cyclin family. (295 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit alpha. (315 aa)
ENSCPOP00000027080UBIQUITIN_CONJUGAT_2 domain-containing protein. (143 aa)
DDB1Damage specific DNA binding protein 1. (1140 aa)
POLHDNA polymerase eta. (712 aa)
Crip1LIM zinc-binding domain-containing protein. (77 aa)
MC1RMelanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. (316 aa)
HMGN1High mobility group nucleosome binding domain 1. (130 aa)
CDKN2DCyclin dependent kinase inhibitor 2D. (166 aa)
TRIM32Tripartite motif containing 32. (653 aa)
SDF4Stromal cell derived factor 4. (378 aa)
MAPK9Mitogen-activated protein kinase. (424 aa)
UBE2BUbiquitin conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
Gdf1TGF_BETA_2 domain-containing protein. (367 aa)
BRSK2BR serine/threonine kinase 2. (718 aa)
ENSCPOP00000024428PARP-type domain-containing protein. (104 aa)
ENSCPOP00000029395DCN1-like protein. (251 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (423 aa)
BMFBcl2 modifying factor. (236 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (865 aa)
POLIDNA polymerase iota. (662 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (300 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1473 aa)
BAXBCL2 associated X, apoptosis regulator. (192 aa)
CREBBPCREB binding protein. (2441 aa)
TRIAP1TP53 regulated inhibitor of apoptosis 1. (76 aa)
PclafPAF domain-containing protein. (112 aa)
UACAUveal autoantigen with coiled-coil domains and ankyrin repeats. (1418 aa)
NOC2LNOC2 like nucleolar associated transcriptional repressor. (799 aa)
MAPK8Mitogen-activated protein kinase. (427 aa)
IMPACTImpact RWD domain protein. (318 aa)
Pmaip1Uncharacterized protein. (102 aa)
Cops9Uncharacterized protein. (57 aa)
C9orf116Chromosome 9 open reading frame 116. (136 aa)
Ube2aUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (326 aa)
OPN3Opsin 3; Belongs to the G-protein coupled receptor 1 family. (399 aa)
Dcun1d3DCN1-like protein. (304 aa)
ZBTB1Zinc finger and BTB domain containing 1. (712 aa)
UBE4BUbiquitination factor E4B. (1347 aa)
MMP3Matrix metallopeptidase 3. (479 aa)
BivmUncharacterized protein. (503 aa)
TP53INP1Tumor protein p53 inducible nuclear protein 1. (240 aa)
MDM2E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family. (491 aa)
POLD1DNA polymerase. (1134 aa)
HYAL3Hyaluronidase. (412 aa)
MMP2Matrix metallopeptidase 2. (662 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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