8 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100730761	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (418 aa)
	GLI3	GLI family zinc finger 3. (1580 aa)
	PAX2	Paired box 2. (393 aa)
	ENSCPOP00000032677	Eph LBD domain-containing protein. (286 aa)
	KCNA2	Potassium voltage-gated channel subfamily A member 2; Belongs to the potassium channel family. (499 aa)
	Chrnb2	Uncharacterized protein. (499 aa)
	EPHB1	EPH receptor B1. (736 aa)
	EPHB2	EPH receptor B2. (949 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCPOP00000032677	EPHB1	ENSCPOP00000032677	ENSCPOP00000001828	Eph LBD domain-containing protein.	EPH receptor B1.	0.894
ENSCPOP00000032677	EPHB2	ENSCPOP00000032677	ENSCPOP00000009739	Eph LBD domain-containing protein.	EPH receptor B2.	0.560
EPHB1	ENSCPOP00000032677	ENSCPOP00000001828	ENSCPOP00000032677	EPH receptor B1.	Eph LBD domain-containing protein.	0.894
EPHB1	EPHB2	ENSCPOP00000001828	ENSCPOP00000009739	EPH receptor B1.	EPH receptor B2.	0.569
EPHB2	ENSCPOP00000032677	ENSCPOP00000009739	ENSCPOP00000032677	EPH receptor B2.	Eph LBD domain-containing protein.	0.560
EPHB2	EPHB1	ENSCPOP00000009739	ENSCPOP00000001828	EPH receptor B2.	EPH receptor B1.	0.569