STRINGSTRING
COL11A1 COL11A1 FN1 FN1 COL4A2 COL4A2 LEO1 LEO1 ITGB5 ITGB5 MAP2K1 MAP2K1 HNF1B HNF1B SOX17 SOX17 VTN VTN LAMB3 LAMB3 CDC73 CDC73 H0VN16_CAVPO H0VN16_CAVPO MMP8 MMP8 CTNNB1 CTNNB1 GRB2 GRB2 HSBP1 HSBP1 ENSCPOP00000024053 ENSCPOP00000024053 Inhba Inhba MMP2 MMP2 COL8A1 COL8A1 Pou5f1 Pou5f1 NR0B1 NR0B1 MMP14 MMP14 NODAL NODAL ITGAV ITGAV EOMES EOMES MMP9 MMP9 LAMA3 LAMA3 ITGA5 ITGA5 SETD2 SETD2 H0VDD3_CAVPO H0VDD3_CAVPO CTR9 CTR9 RTF1 RTF1 ITGA4 ITGA4 COL12A1 COL12A1 MMP15 MMP15 Paf1 Paf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL11A1Collagen type XI alpha 1 chain. (1712 aa)
FN1Fibronectin 1. (2478 aa)
COL4A2Collagen type IV alpha 2 chain. (1479 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (658 aa)
ITGB5Integrin beta; Belongs to the integrin beta chain family. (801 aa)
MAP2K1Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (393 aa)
HNF1BHNF1 homeobox B. (558 aa)
SOX17SRY-box transcription factor 17. (400 aa)
VTNSMB domain-containing protein. (482 aa)
LAMB3Laminin subunit beta 3. (1174 aa)
CDC73Cell division cycle 73. (430 aa)
H0VN16_CAVPOUncharacterized protein. (71 aa)
MMP8Matrix metallopeptidase 8. (468 aa)
CTNNB1Catenin beta 1. (781 aa)
GRB2Growth factor receptor bound protein 2. (217 aa)
HSBP1Heat shock factor binding protein 1. (76 aa)
ENSCPOP00000024053Uncharacterized protein. (948 aa)
InhbaTGF_BETA_2 domain-containing protein. (133 aa)
MMP2Matrix metallopeptidase 2. (662 aa)
COL8A1Collagen type VIII alpha 1 chain. (744 aa)
Pou5f1POU domain protein. (361 aa)
NR0B1Nuclear receptor subfamily 0 group B member 1. (383 aa)
MMP14Matrix metallopeptidase 14. (581 aa)
NODALNodal growth differentiation factor. (351 aa)
ITGAVIntegrin subunit alpha V; Belongs to the integrin alpha chain family. (963 aa)
EOMESEomesodermin. (697 aa)
MMP9Matrix metallopeptidase 9. (715 aa)
LAMA3Laminin subunit alpha 3. (3262 aa)
ITGA5Integrin subunit alpha 5; Belongs to the integrin alpha chain family. (1102 aa)
SETD2SET domain containing 2, histone lysine methyltransferase. (2565 aa)
H0VDD3_CAVPOHomeobox domain-containing protein. (286 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (732 aa)
ITGA4Integrin subunit alpha 4; Belongs to the integrin alpha chain family. (1021 aa)
COL12A1Collagen type XII alpha 1 chain. (3066 aa)
MMP15Matrix metallopeptidase 15. (663 aa)
Paf1Uncharacterized protein. (535 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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