39 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DYNC2LI1	Dynein cytoplasmic 2 light intermediate chain 1. (351 aa)
	LOC100721103	TPR_REGION domain-containing protein. (665 aa)
	ICK	Intestinal cell kinase. (632 aa)
	MAK	Male germ cell associated kinase. (622 aa)
	IFT140	Intraflagellar transport 140. (1463 aa)
	NME7	Nucleoside diphosphate kinase 7; Belongs to the NDK family. (376 aa)
	WDR19	WD repeat domain 19. (1341 aa)
	IFT122	Intraflagellar transport 122. (1218 aa)
	TRAF3IP1	TRAF3 interacting protein 1. (634 aa)
	LCA5	Lebercilin LCA5. (659 aa)
	IFT46	Intraflagellar transport 46. (303 aa)
	WDR35	WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking. (1157 aa)
	TTC26	Tetratricopeptide repeat domain 26. (554 aa)
	IFT57	Intraflagellar transport 57. (429 aa)
	HSPB11	Heat shock protein family B (small) member 11. (144 aa)
	IFT88	Intraflagellar transport 88. (825 aa)
	CEP131	Centrosomal protein 131. (1070 aa)
	SSX2IP	SSX family member 2 interacting protein. (598 aa)
	IFT74	Intraflagellar transport 74. (586 aa)
	TTC21A	Tetratricopeptide repeat domain 21A. (1305 aa)
	IFT81	Intraflagellar transport 81. (654 aa)
	KIF3B	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (748 aa)
	IFT27	Intraflagellar transport 27. (139 aa)
	IFT52	Intraflagellar transport 52. (406 aa)
	Rpgr	Uncharacterized protein. (645 aa)
	LCA5L	Lebercilin LCA5 like. (684 aa)
	BBS12	Bardet-Biedl syndrome 12. (704 aa)
	IFT43	Intraflagellar transport 43. (205 aa)
	TTC21B	Tetratricopeptide repeat domain 21B. (1316 aa)
	IFT172	Intraflagellar transport 172. (1749 aa)
	SSNA1	SS nuclear autoantigen 1. (119 aa)
	DYNLL1	Dynein light chain. (89 aa)
	DYNC2H1	Dynein cytoplasmic 2 heavy chain 1. (4253 aa)
	IFT20	Intraflagellar transport 20. (132 aa)
	ENSCPOP00000028975	Uncharacterized protein. (138 aa)
	ARL3	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family. (189 aa)
	WDR34	WD repeat domain 34. (534 aa)
	WDR60	WD repeat domain 60. (986 aa)
	PCM1	Pericentriolar material 1. (2080 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL3	IFT122	ENSCPOP00000030497	ENSCPOP00000004479	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 122.	0.556
ARL3	IFT20	ENSCPOP00000030497	ENSCPOP00000028009	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 20.	0.789
ARL3	IFT27	ENSCPOP00000030497	ENSCPOP00000015715	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 27.	0.623
ARL3	IFT57	ENSCPOP00000030497	ENSCPOP00000007286	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 57.	0.594
ARL3	IFT74	ENSCPOP00000030497	ENSCPOP00000011688	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 74.	0.432
ARL3	IFT88	ENSCPOP00000030497	ENSCPOP00000008226	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 88.	0.752
ARL3	KIF3B	ENSCPOP00000030497	ENSCPOP00000014486	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.502
ARL3	WDR19	ENSCPOP00000030497	ENSCPOP00000003826	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	WD repeat domain 19.	0.418
BBS12	IFT27	ENSCPOP00000019320	ENSCPOP00000015715	Bardet-Biedl syndrome 12.	Intraflagellar transport 27.	0.542
BBS12	IFT88	ENSCPOP00000019320	ENSCPOP00000008226	Bardet-Biedl syndrome 12.	Intraflagellar transport 88.	0.420
CEP131	IFT172	ENSCPOP00000008543	ENSCPOP00000024599	Centrosomal protein 131.	Intraflagellar transport 172.	0.482
CEP131	IFT27	ENSCPOP00000008543	ENSCPOP00000015715	Centrosomal protein 131.	Intraflagellar transport 27.	0.516
CEP131	IFT46	ENSCPOP00000008543	ENSCPOP00000005661	Centrosomal protein 131.	Intraflagellar transport 46.	0.416
CEP131	IFT52	ENSCPOP00000008543	ENSCPOP00000016817	Centrosomal protein 131.	Intraflagellar transport 52.	0.697
CEP131	IFT57	ENSCPOP00000008543	ENSCPOP00000007286	Centrosomal protein 131.	Intraflagellar transport 57.	0.479
CEP131	IFT81	ENSCPOP00000008543	ENSCPOP00000013342	Centrosomal protein 131.	Intraflagellar transport 81.	0.641
CEP131	IFT88	ENSCPOP00000008543	ENSCPOP00000008226	Centrosomal protein 131.	Intraflagellar transport 88.	0.601
CEP131	LOC100721103	ENSCPOP00000008543	ENSCPOP00000000603	Centrosomal protein 131.	TPR_REGION domain-containing protein.	0.509
CEP131	PCM1	ENSCPOP00000008543	ENSCPOP00000032546	Centrosomal protein 131.	Pericentriolar material 1.	0.794
CEP131	TRAF3IP1	ENSCPOP00000008543	ENSCPOP00000004680	Centrosomal protein 131.	TRAF3 interacting protein 1.	0.440