STRINGSTRING
SPTBN4 SPTBN4 HTR1A HTR1A Map2 Map2 SERPINF1 SERPINF1 CCK CCK TPX2 TPX2 Aurka Aurka H0VW22_CAVPO H0VW22_CAVPO NDEL1 NDEL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPTBN4Spectrin beta chain; Belongs to the spectrin family. (2530 aa)
HTR1A5-hydroxytryptamine receptor 1A. (421 aa)
Map2Microtubule-associated protein. (559 aa)
SERPINF1SERPIN domain-containing protein; Belongs to the serpin family. (418 aa)
CCKCholecystokinin. (115 aa)
TPX2TPX2 microtubule nucleation factor. (747 aa)
AurkaProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (384 aa)
H0VW22_CAVPOProtein kinase domain-containing protein. (399 aa)
NDEL1NudE neurodevelopment protein 1 like 1. (345 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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