STRINGSTRING
SCLT1 SCLT1 SPTBN4 SPTBN4 GLDN GLDN Ank3 Ank3 MYOC MYOC NFASC NFASC KCNB1 KCNB1 CNTN2 CNTN2 KCNIP2 KCNIP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCLT1Sodium channel and clathrin linker 1. (688 aa)
SPTBN4Spectrin beta chain; Belongs to the spectrin family. (2530 aa)
GLDNGliomedin. (384 aa)
Ank3Uncharacterized protein. (1948 aa)
MYOCMyocilin. (490 aa)
NFASCNeurofascin. (1346 aa)
KCNB1Potassium voltage-gated channel subfamily B member 1; Belongs to the potassium channel family. (855 aa)
CNTN2Contactin 2. (1041 aa)
KCNIP2Potassium voltage-gated channel interacting protein 2. (270 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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