STRINGSTRING
GATD1 GATD1 ALDH3B1 ALDH3B1 PNKD PNKD Aldh2 Aldh2 HAGH HAGH PDXP PDXP AKR1A1 AKR1A1 AGXT AGXT PARK7 PARK7 HOGA1 HOGA1 AGXT2 AGXT2 HAGHL HAGHL ADH5 ADH5 ESD ESD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GATD1Glutamine amidotransferase like class 1 domain containing 1. (220 aa)
ALDH3B1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (468 aa)
PNKDPNKD metallo-beta-lactamase domain containing. (424 aa)
Aldh2Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (521 aa)
HAGHHydroxyacylglutathione hydrolase. (260 aa)
PDXPPyridoxal phosphatase; Belongs to the HAD-like hydrolase superfamily. (292 aa)
AKR1A1Aldo-keto reductase family 1 member A1. (325 aa)
AGXTSerine--pyruvate aminotransferase. (414 aa)
PARK7Parkinsonism associated deglycase. (189 aa)
HOGA14-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family. (321 aa)
AGXT2Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (514 aa)
HAGHLHydroxyacylglutathione hydrolase like. (228 aa)
ADH5S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (367 aa)
ESDS-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (282 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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