55 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LARP1	La ribonucleoprotein domain family member 1. (954 aa)
	RBM10	RNA binding motif protein 10. (931 aa)
	Paip1	MIF4G domain-containing protein. (399 aa)
	TENT5B	Terminal nucleotidyltransferase 5B. (423 aa)
	ENSCPOP00000030783	MIF4G domain-containing protein. (390 aa)
	ENSCPOP00000029900	Uncharacterized protein. (195 aa)
	TARDBP	TAR DNA binding protein. (413 aa)
	DHX9	DExH-box helicase 9. (1373 aa)
	FUS	FUS RNA binding protein. (490 aa)
	SYNCRIP	Synaptotagmin binding cytoplasmic RNA interacting protein. (562 aa)
	GDNF	Glial cell derived neurotrophic factor. (210 aa)
	HNRNPD	Heterogeneous nuclear ribonucleoprotein D. (313 aa)
	E2F1	E2F transcription factor 1. (389 aa)
	TENT5C	Terminal nucleotidyltransferase 5C. (391 aa)
	CSDE1	Cold shock domain-containing protein E1; RNA-binding protein. May be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain (By similarity). (779 aa)
	EIF4ENIF1	Eukaryotic translation initiation factor 4E nuclear import factor 1. (991 aa)
	TRAF2	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (501 aa)
	TENT5A	Terminal nucleotidyltransferase 5A. (432 aa)
	ENSCPOP00000025764	MIF4G domain-containing protein. (404 aa)
	ZFP36	ZFP36 ring finger protein. (313 aa)
	Elavl4	ELAV-like protein; Belongs to the RRM elav family. (385 aa)
	BOLL	Boule homolog, RNA binding protein. (322 aa)
	RBM24	RNA binding motif protein 24. (236 aa)
	TRAF5	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (565 aa)
	HNRNPA0	Heterogeneous nuclear ribonucleoprotein A0. (301 aa)
	LOC100725600	Uncharacterized protein. (536 aa)
	MYD88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (294 aa)
	H0W1V8_CAVPO	Uncharacterized protein. (319 aa)
	TIRAP	TIR domain containing adaptor protein. (221 aa)
	MAPKAPK2	MAPK activated protein kinase 2; Belongs to the protein kinase superfamily. (383 aa)
	LOC101787900	Uncharacterized protein. (501 aa)
	MEIOC	Meiosis specific with coiled-coil domain. (919 aa)
	CIRBP	Cold inducible RNA binding protein. (173 aa)
	IGF2BP1	Insulin like growth factor 2 mRNA binding protein 1. (547 aa)
	THRAP3	Thyroid hormone receptor associated protein 3. (953 aa)
	IGF2BP3	Insulin like growth factor 2 mRNA binding protein 3. (519 aa)
	TRAF3IP2	TRAF3 interacting protein 2. (561 aa)
	RBM38	RNA binding motif protein 38. (247 aa)
	SLC11A1	Solute carrier family 11 member 1. (541 aa)
	HNRNPU	Heterogeneous nuclear ribonucleoprotein U. (822 aa)
	ELAVL1	ELAV like RNA binding protein 1. (295 aa)
	Srsf1	Uncharacterized protein. (253 aa)
	MTOR	Serine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2549 aa)
	YBX1	YB1. (324 aa)
	Rbm46	Uncharacterized protein. (534 aa)
	LOC101788648	Uncharacterized protein. (485 aa)
	YBX2	Y-box binding protein 2. (359 aa)
	DND1	DND microRNA-mediated repression inhibitor 1. (353 aa)
	IKBKE	Inhibitor of nuclear factor kappa B kinase subunit epsilon. (716 aa)
	DAZL	Deleted in azoospermia like. (295 aa)
	IGF2BP2	Insulin like growth factor 2 mRNA binding protein 2. (539 aa)
	DICER1	Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. (1903 aa)
	AXIN2	Axin 2. (802 aa)
	ANGEL2	Angel homolog 2. (544 aa)
	NOCT	Nocturnin. (432 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BOLL	ELAVL1	ENSCPOP00000022640	ENSCPOP00000010690	Boule homolog, RNA binding protein.	ELAV like RNA binding protein 1.	0.468
BOLL	ENSCPOP00000025764	ENSCPOP00000022640	ENSCPOP00000025764	Boule homolog, RNA binding protein.	MIF4G domain-containing protein.	0.502
BOLL	ENSCPOP00000030783	ENSCPOP00000022640	ENSCPOP00000030783	Boule homolog, RNA binding protein.	MIF4G domain-containing protein.	0.502
BOLL	Elavl4	ENSCPOP00000022640	ENSCPOP00000024257	Boule homolog, RNA binding protein.	ELAV-like protein; Belongs to the RRM elav family.	0.476
BOLL	Paip1	ENSCPOP00000022640	ENSCPOP00000002298	Boule homolog, RNA binding protein.	MIF4G domain-containing protein.	0.502
BOLL	Srsf1	ENSCPOP00000022640	ENSCPOP00000010576	Boule homolog, RNA binding protein.	Uncharacterized protein.	0.565
BOLL	YBX2	ENSCPOP00000022640	ENSCPOP00000008565	Boule homolog, RNA binding protein.	Y-box binding protein 2.	0.408
CIRBP	CSDE1	ENSCPOP00000014762	ENSCPOP00000031897	Cold inducible RNA binding protein.	Cold shock domain-containing protein E1; RNA-binding protein. May be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain (By similarity).	0.418
CIRBP	DHX9	ENSCPOP00000014762	ENSCPOP00000029169	Cold inducible RNA binding protein.	DExH-box helicase 9.	0.411
CIRBP	ELAVL1	ENSCPOP00000014762	ENSCPOP00000010690	Cold inducible RNA binding protein.	ELAV like RNA binding protein 1.	0.519
CIRBP	ENSCPOP00000025764	ENSCPOP00000014762	ENSCPOP00000025764	Cold inducible RNA binding protein.	MIF4G domain-containing protein.	0.504
CIRBP	ENSCPOP00000029900	ENSCPOP00000014762	ENSCPOP00000029900	Cold inducible RNA binding protein.	Uncharacterized protein.	0.567
CIRBP	ENSCPOP00000030783	ENSCPOP00000014762	ENSCPOP00000030783	Cold inducible RNA binding protein.	MIF4G domain-containing protein.	0.504
CIRBP	Elavl4	ENSCPOP00000014762	ENSCPOP00000024257	Cold inducible RNA binding protein.	ELAV-like protein; Belongs to the RRM elav family.	0.407
CIRBP	FUS	ENSCPOP00000014762	ENSCPOP00000028839	Cold inducible RNA binding protein.	FUS RNA binding protein.	0.589
CIRBP	HNRNPA0	ENSCPOP00000014762	ENSCPOP00000020541	Cold inducible RNA binding protein.	Heterogeneous nuclear ribonucleoprotein A0.	0.649
CIRBP	HNRNPD	ENSCPOP00000014762	ENSCPOP00000026748	Cold inducible RNA binding protein.	Heterogeneous nuclear ribonucleoprotein D.	0.552
CIRBP	HNRNPU	ENSCPOP00000014762	ENSCPOP00000010693	Cold inducible RNA binding protein.	Heterogeneous nuclear ribonucleoprotein U.	0.554
CIRBP	LOC101788648	ENSCPOP00000014762	ENSCPOP00000009212	Cold inducible RNA binding protein.	Uncharacterized protein.	0.567
CIRBP	Paip1	ENSCPOP00000014762	ENSCPOP00000002298	Cold inducible RNA binding protein.	MIF4G domain-containing protein.	0.504