STRINGSTRING
Parp1 Parp1 VTI1A VTI1A ENSCPOP00000024428 ENSCPOP00000024428 ITPR1 ITPR1 VPS35 VPS35 XRCC1 XRCC1 MAP1A MAP1A SPR SPR MTOR MTOR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1011 aa)
VTI1AVesicle transport through interaction with t-SNAREs 1A. (217 aa)
ENSCPOP00000024428PARP-type domain-containing protein. (104 aa)
ITPR1Inositol 1,4,5-trisphosphate receptor type 1. (2738 aa)
VPS35Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (797 aa)
XRCC1X-ray repair cross complementing 1. (629 aa)
MAP1AMicrotubule associated protein 1A. (2915 aa)
SPRSepiapterin reductase. (262 aa)
MTORSerine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2549 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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