STRINGSTRING
PKD2 PKD2 PAX2 PAX2 PAX8 PAX8 CALB1 CALB1 PKD1 PKD1 UMOD UMOD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PKD2Polycystin 2, transient receptor potential cation channel. (839 aa)
PAX2Paired box 2. (393 aa)
PAX8Paired box 8. (457 aa)
CALB1Calbindin 1. (275 aa)
PKD1Polycystin 1, transient receptor potential channel interacting. (4283 aa)
UMODUromodulin. (644 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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