STRINGSTRING
LOC100714967 LOC100714967 CNOT7 CNOT7 RAD1 RAD1 GEN1 GEN1 ELAC1 ELAC1 ENSCPOP00000023532 ENSCPOP00000023532 PLD6 PLD6 RAD9A RAD9A Dclre1b Dclre1b EXOSC9 EXOSC9 EDC4 EDC4 POLR3K POLR3K TOE1 TOE1 ERCC2 ERCC2 DIS3 DIS3 EXO5 EXO5 ENSCPOP00000025543 ENSCPOP00000025543 DNASE1L3 DNASE1L3 DNASE1L2 DNASE1L2 CNOT6 CNOT6 RPP40 RPP40 ENDOU ENDOU ERI2 ERI2 ENSCPOP00000026667 ENSCPOP00000026667 ABT1 ABT1 ENSCPOP00000026818 ENSCPOP00000026818 ENSCPOP00000027661 ENSCPOP00000027661 NUDT21 NUDT21 EME2 EME2 ENPP2 ENPP2 LOC100715543 LOC100715543 Rps3 Rps3 RIDA RIDA EXOSC2 EXOSC2 CPSF4 CPSF4 EXOG EXOG APTX APTX ENSCPOP00000029431 ENSCPOP00000029431 MGME1 MGME1 RPP30 RPP30 TSNAX TSNAX Fip1l1 Fip1l1 ENSCPOP00000030166 ENSCPOP00000030166 RAD2 RAD2 ENPP3 ENPP3 RNASEH2A RNASEH2A PAN3 PAN3 ERCC1 ERCC1 EXOSC10 EXOSC10 Rnase6 Rnase6 LOC100717485 LOC100717485 ISG20L2 ISG20L2 APEX1 APEX1 FEN1 FEN1 AGO2 AGO2 LOC100718706 LOC100718706 LOC100716663 LOC100716663 CPSF6 CPSF6 LAS1L LAS1L Tut1 Tut1 USB1 USB1 RNASE12 RNASE12 NOP9 NOP9 NYNRIN NYNRIN MRE11 MRE11 ZC3H12D ZC3H12D TSR1 TSR1 SMG6 SMG6 PAN2 PAN2 DROSHA DROSHA DXO DXO ENPP1 ENPP1 RCL1 RCL1 EDC3 EDC3 Tatdn2 Tatdn2 TREX1 TREX1 H0VUW4_CAVPO H0VUW4_CAVPO RPP38 RPP38 H0VVN7_CAVPO H0VVN7_CAVPO N4BP2 N4BP2 LOC100720895 LOC100720895 TREX2 TREX2 CSTF2 CSTF2 ANKRD31 ANKRD31 RRP36 RRP36 C12orf10 C12orf10 AEN AEN PNLDC1 PNLDC1 PELO PELO XRCC3 XRCC3 MBLAC1 MBLAC1 MEI4 MEI4 H0W0H8_CAVPO H0W0H8_CAVPO Rnaseh1 Rnaseh1 LOC100718426 LOC100718426 N4BP1 N4BP1 NOL9 NOL9 TRIR TRIR NOB1 NOB1 KHNYN KHNYN H0W827_CAVPO H0W827_CAVPO MRPL44 MRPL44 RRS1 RRS1 RAG1 RAG1 ENDOG ENDOG LOC100717209 LOC100717209 EME1 EME1 Slx1a Slx1a H0WBK1_CAVPO H0WBK1_CAVPO LOC100736130 LOC100736130 POLD1 POLD1 LOC100712949 LOC100712949 PTBP1 PTBP1 ZC3H12C ZC3H12C PARN PARN ENSCPOP00000022359 ENSCPOP00000022359 ERI1 ERI1 TATDN1 TATDN1 ISG20 ISG20 AGO3 AGO3 Bivm Bivm UTP23 UTP23 DNA2 DNA2 DCP1A DCP1A DIS3L DIS3L DFFB DFFB EXO1 EXO1 BMS1 BMS1 ERN1 ERN1 DNASE2 DNASE2 PIWIL2 PIWIL2 FCF1 FCF1 ERCC5 ERCC5 REXO4 REXO4 FANCM FANCM MEIOB MEIOB XPA XPA PDE12 PDE12 DCP2 DCP2 RPS21 RPS21 PLD4 PLD4 ERCC3 ERCC3 ENDOD1 ENDOD1 Rad50 Rad50 ZNRD1 ZNRD1 YBEY YBEY TATDN3 TATDN3 NUDT12 NUDT12 DCLRE1C DCLRE1C POP1 POP1 WRN WRN NCBP2 NCBP2 POP4 POP4 NTHL1 NTHL1 LRRC27 LRRC27 N4BP2L1 N4BP2L1 SLFNL1 SLFNL1 Xrn1 Xrn1 CNOT8 CNOT8 APLF APLF NOCT NOCT ANGEL2 ANGEL2 RNASEK RNASEK PCF11 PCF11 CSTF2T CSTF2T DICER1 DICER1 RPP14 RPP14 EXOSC8 EXOSC8 ERCC4 ERCC4 RAD51C RAD51C CNOT2 CNOT2 H0V3Y8_CAVPO H0V3Y8_CAVPO PIWIL1 PIWIL1 EXOSC7 EXOSC7 INTS11 INTS11 DIS3L2 DIS3L2 DCP1B DCP1B NME1 NME1 BOP1 BOP1 ENDOV ENDOV DNASE1L1 DNASE1L1 ASTE1 ASTE1 POP7 POP7 ERN2 ERN2 TBL3 TBL3 TTC38 TTC38 RPP21 RPP21 DBR1 DBR1 HORMAD1 HORMAD1 SND1 SND1 TDP2 TDP2 HELZ2 HELZ2 Ankle1 Ankle1 H0V9B4_CAVPO H0V9B4_CAVPO APEX2 APEX2 POLG POLG LACTB2 LACTB2 RBBP8 RBBP8 Rnaset2 Rnaset2 Tsen2 Tsen2 SAMHD1 SAMHD1 MUS81 MUS81 EXOSC3 EXOSC3 MARF1 MARF1 OGG1 OGG1 REXO5 REXO5 ELAC2 ELAC2 MAML1 MAML1 XRN2 XRN2 PLD3 PLD3 LOC100721277 LOC100721277 CPSF7 CPSF7 EXD2 EXD2 KRI1 KRI1 CNOT6L CNOT6L H0VGS2_CAVPO H0VGS2_CAVPO REXO2 REXO2 CPSF2 CPSF2 PNPT1 PNPT1 ZC3H12A ZC3H12A CPSF3 CPSF3 ANGEL1 ANGEL1 DNASE2B DNASE2B AGO4 AGO4 SPO11 SPO11 ATAD5 ATAD5 POLR2I POLR2I TDP1 TDP1 POP5 POP5 NCBP1 NCBP1 REXO1 REXO1 TSEN34 TSEN34 CNOT1 CNOT1 FAN1 FAN1 POLE POLE CCDC36 CCDC36 ERI3 ERI3 DCLRE1A DCLRE1A SWT1 SWT1
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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Known Interactions
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Predicted Interactions
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LOC100714967Ribonuclease A E1; Belongs to the pancreatic ribonuclease family. (156 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (285 aa)
RAD1RAD1 checkpoint DNA exonuclease. (282 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (916 aa)
ELAC1ElaC ribonuclease Z 1. (363 aa)
ENSCPOP00000023532XRN_N domain-containing protein. (103 aa)
PLD6Phospholipase D family member 6. (225 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (384 aa)
Dclre1bLactamase_B domain-containing protein. (190 aa)
EXOSC9Exosome component 9. (439 aa)
EDC4Enhancer of mRNA decapping 4. (1405 aa)
POLR3KDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
TOE1Target of EGR1, exonuclease. (509 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (760 aa)
DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (987 aa)
EXO5Exonuclease 5. (373 aa)
ENSCPOP00000025543AAA_12 domain-containing protein. (243 aa)
DNASE1L3Deoxyribonuclease; Belongs to the DNase I family. (302 aa)
DNASE1L2Deoxyribonuclease; Belongs to the DNase I family. (278 aa)
CNOT6CCR4-NOT transcription complex subunit 6. (534 aa)
RPP40Ribonuclease P/MRP subunit p40. (363 aa)
ENDOUEndonuclease, poly(U) specific. (411 aa)
ERI2ERI1 exoribonuclease family member 2. (687 aa)
ENSCPOP00000026667Uncharacterized protein. (62 aa)
ABT1Activator of basal transcription 1. (269 aa)
ENSCPOP00000026818Uncharacterized protein. (143 aa)
ENSCPOP00000027661Uncharacterized protein. (177 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (223 aa)
EME2Essential meiotic structure-specific endonuclease subunit 2. (371 aa)
ENPP2Ectonucleotide pyrophosphatase/phosphodiesterase 2. (857 aa)
LOC100715543DEAD-box helicase 1. (502 aa)
Rps3KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (243 aa)
RIDAReactive intermediate imine deaminase A homolog. (137 aa)
EXOSC2Exosome component 2. (293 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (244 aa)
EXOGExo/endonuclease G. (358 aa)
APTXAprataxin. (341 aa)
ENSCPOP00000029431Uncharacterized protein. (111 aa)
MGME1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity but is also capable of endoduclease activity on linear substrates. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair, possibly via the processing of displaced DNA containing Okazaki fragments during RNA- primed DNA synthesis on the lagging strand or via processing of DNA flaps during long-patch base excision repair; Belongs to the MGME1 family. (356 aa)
RPP30Ribonuclease P/MRP subunit p30. (268 aa)
TSNAXTranslin associated factor X. (290 aa)
Fip1l1Fip1 domain-containing protein. (555 aa)
ENSCPOP00000030166RNase_Zc3h12a domain-containing protein. (52 aa)
RAD2Ribonuclease A D2; Belongs to the pancreatic ribonuclease family. (187 aa)
ENPP3Ectonucleotide pyrophosphatase/phosphodiesterase 3. (772 aa)
RNASEH2ARibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (298 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (751 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (300 aa)
EXOSC10Exosome component 10. (901 aa)
Rnase6Ribonuclease A D1; Belongs to the pancreatic ribonuclease family. (151 aa)
LOC100717485RNAse_Pc domain-containing protein; Belongs to the pancreatic ribonuclease family. (148 aa)
ISG20L2Interferon stimulated exonuclease gene 20 like 2. (361 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
AGO2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (857 aa)
LOC100718706Nudix hydrolase domain-containing protein. (194 aa)
LOC100716663RNAse_Pc domain-containing protein; Belongs to the pancreatic ribonuclease family. (147 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (588 aa)
LAS1LLAS1 like, ribosome biogenesis factor. (698 aa)
Tut1RRM domain-containing protein. (852 aa)
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA 3' end-terminated with a 2',3'-cyclic phosphate; Belongs to the 2H phosphoesterase superfamily. USB1 family. (266 aa)
RNASE12Ribonuclease A family member 12 (inactive); Belongs to the pancreatic ribonuclease family. (144 aa)
NOP9NOP9 nucleolar protein. (643 aa)
NYNRINNYN domain and retroviral integrase containing. (1949 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (706 aa)
ZC3H12DZinc finger CCCH-type containing 12D. (464 aa)
TSR1TSR1 ribosome maturation factor. (752 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1420 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1204 aa)
DROSHADrosha ribonuclease III. (1295 aa)
DXODecapping exoribonuclease. (397 aa)
ENPP1Ectonucleotide pyrophosphatase/phosphodiesterase 1. (900 aa)
RCL1RNA terminal phosphate cyclase like 1. (373 aa)
EDC3Enhancer of mRNA decapping 3. (508 aa)
Tatdn2Uncharacterized protein. (624 aa)
TREX1Three prime repair exonuclease 1. (314 aa)
H0VUW4_CAVPOUncharacterized protein; Belongs to the argonaute family. (746 aa)
RPP38Ribonuclease P/MRP subunit p38. (284 aa)
H0VVN7_CAVPORNAse_Pc domain-containing protein; Belongs to the pancreatic ribonuclease family. (151 aa)
N4BP2NEDD4 binding protein 2. (1675 aa)
LOC100720895Ribonuclease A C1; Belongs to the pancreatic ribonuclease family. (152 aa)
TREX2Three prime repair exonuclease 2. (236 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
ANKRD31Ankyrin repeat domain 31. (1672 aa)
RRP36Ribosomal RNA processing 36. (224 aa)
C12orf10Chromosome 12 open reading frame 10. (377 aa)
AENApoptosis enhancing nuclease. (320 aa)
PNLDC1PARN like, ribonuclease domain containing 1. (518 aa)
PELOProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (338 aa)
MBLAC1Metallo-beta-lactamase domain containing 1. (268 aa)
MEI4Meiotic double-stranded break formation protein 4. (309 aa)
H0W0H8_CAVPOUncharacterized protein. (336 aa)
Rnaseh1Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (294 aa)
LOC100718426Uncharacterized protein. (152 aa)
N4BP1NEDD4 binding protein 1. (886 aa)
NOL9Nucleolar protein 9. (724 aa)
TRIRTelomerase RNA component interacting RNase. (175 aa)
NOB1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (409 aa)
KHNYNKH and NYN domain containing. (657 aa)
H0W827_CAVPOUncharacterized protein. (103 aa)
MRPL44Mitochondrial ribosomal protein L44. (332 aa)
RRS1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (357 aa)
RAG1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1043 aa)
ENDOGEndonuclease. (299 aa)
LOC100717209Ribonuclease pancreatic B; Belongs to the pancreatic ribonuclease family. (154 aa)
EME1Essential meiotic structure-specific endonuclease 1. (578 aa)
Slx1aStructure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (266 aa)
H0WBK1_CAVPOUncharacterized protein. (163 aa)
LOC100736130Uncharacterized protein. (287 aa)
POLD1DNA polymerase. (1134 aa)
LOC100712949Phospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family. (203 aa)
PTBP1Polypyrimidine tract binding protein 1. (557 aa)
ZC3H12CZinc finger CCCH-type containing 12C. (886 aa)
PARNPoly(A)-specific ribonuclease. (637 aa)
ENSCPOP00000022359Phospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family. (167 aa)
ERI1Exoribonuclease 1. (343 aa)
TATDN1TatD DNase domain containing 1. (297 aa)
ISG20Interferon stimulated exonuclease gene 20. (190 aa)
AGO3Argonaute RISC catalytic component 3; Belongs to the argonaute family. (827 aa)
BivmUncharacterized protein. (503 aa)
UTP23UTP23 small subunit processome component. (270 aa)
DNA2DNA replication helicase/nuclease 2. (1021 aa)
DCP1ADecapping mRNA 1A. (601 aa)
DIS3LDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1055 aa)
DFFBDNA fragmentation factor subunit beta. (302 aa)
EXO1Exonuclease 1. (839 aa)
BMS1BMS1 ribosome biogenesis factor. (1277 aa)
ERN1Endoplasmic reticulum to nucleus signaling 1. (974 aa)
DNASE2Deoxyribonuclease 2, lysosomal. (357 aa)
PIWIL2Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family. (971 aa)
FCF1PINc domain-containing protein. (198 aa)
ERCC5ERCC excision repair 5, endonuclease. (1059 aa)
REXO4REX4 homolog, 3'-5' exonuclease. (437 aa)
FANCMFA complementation group M. (1971 aa)
MEIOBMeiosis specific with OB-fold. (471 aa)
XPAXPA, DNA damage recognition and repair factor. (263 aa)
PDE12Phosphodiesterase 12. (608 aa)
DCP2Decapping mRNA 2. (422 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (86 aa)
PLD4Phospholipase D family member 4. (501 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (781 aa)
ENDOD1Endonuclease domain containing 1. (457 aa)
Rad50Zinc-hook domain-containing protein. (1275 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (100 aa)
YBEYYbeY metalloendoribonuclease. (164 aa)
TATDN3TatD DNase domain containing 3. (229 aa)
NUDT12Nudix hydrolase 12. (462 aa)
DCLRE1CDNA cross-link repair 1C. (688 aa)
POP1POP1 homolog, ribonuclease P/MRP subunit. (1012 aa)
WRNWRN RecQ like helicase. (1462 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
POP4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (220 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (260 aa)
LRRC27Leucine rich repeat containing 27. (508 aa)
N4BP2L1NEDD4 binding protein 2 like 1. (236 aa)
SLFNL1Schlafen like 1. (371 aa)
Xrn15'-3' exoribonuclease 1. (1386 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (292 aa)
APLFAprataxin and PNKP like factor. (498 aa)
NOCTNocturnin. (432 aa)
ANGEL2Angel homolog 2. (544 aa)
RNASEKRibonuclease K. (98 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1553 aa)
CSTF2TCleavage stimulation factor subunit 2 tau variant. (623 aa)
DICER1Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. (1903 aa)
RPP14Ribonuclease P/MRP subunit p14. (124 aa)
EXOSC8Exosome component 8. (276 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (916 aa)
RAD51CRAD51 paralog C. (373 aa)
CNOT2CCR4-NOT transcription complex subunit 2. (544 aa)
H0V3Y8_CAVPOPRORP domain-containing protein. (566 aa)
PIWIL1Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family. (835 aa)
EXOSC7Exosome component 7. (291 aa)
INTS11Integrator complex subunit 11. (611 aa)
DIS3L2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase, such as ZCCHC11/TUT4. Mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. Mediates degradation of uridylated pre-let-7 miRNAs, contributing to the maintenance of embryonic stem (ES) cells. Essential for correct mi [...] (877 aa)
DCP1BDecapping mRNA 1B. (592 aa)
NME1Nucleoside diphosphate kinase. (152 aa)
BOP1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (734 aa)
ENDOVEndonuclease V. (260 aa)
DNASE1L1Deoxyribonuclease; Belongs to the DNase I family. (307 aa)
ASTE1Asteroid homolog 1. (685 aa)
POP7Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences; Belongs to the histone-like Alba family. (140 aa)
ERN2Endoplasmic reticulum to nucleus signaling 2. (902 aa)
TBL3Transducin beta like 3. (800 aa)
TTC38Tetratricopeptide repeat domain 38. (468 aa)
RPP21Ribonuclease P/MRP subunit p21. (161 aa)
DBR1Debranching RNA lariats 1. (544 aa)
HORMAD1HORMA domain containing 1. (377 aa)
SND1Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. (910 aa)
TDP2Tyrosyl-DNA phosphodiesterase 2. (358 aa)
HELZ2Helicase with zinc finger 2. (2942 aa)
Ankle1Uncharacterized protein. (520 aa)
H0V9B4_CAVPOPhospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family. (230 aa)
APEX2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (514 aa)
POLGDNA polymerase gamma, catalytic subunit. (1206 aa)
LACTB2Lactamase beta 2. (288 aa)
RBBP8RB binding protein 8, endonuclease. (900 aa)
Rnaset2Uncharacterized protein; Belongs to the RNase T2 family. (253 aa)
Tsen2tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (448 aa)
SAMHD1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1. (526 aa)
MUS81MUS81 structure-specific endonuclease subunit. (562 aa)
EXOSC3Exosome component 3. (275 aa)
MARF1Meiosis regulator and mRNA stability factor 1. (1738 aa)
OGG18-oxoguanine DNA glycosylase. (303 aa)
REXO5RNA exonuclease 5. (814 aa)
ELAC2ElaC ribonuclease Z 2. (833 aa)
MAML1Mastermind like transcriptional coactivator 1. (794 aa)
XRN25'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (950 aa)
PLD3Phospholipase D family member 3. (490 aa)
LOC100721277Uncharacterized protein. (681 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (471 aa)
EXD2Exonuclease 3'-5' domain containing 2. (619 aa)
KRI1KRI1 homolog. (693 aa)
CNOT6LCCR4-NOT transcription complex subunit 6 like. (462 aa)
H0VGS2_CAVPOUncharacterized protein. (611 aa)
REXO2RNA exonuclease 2. (237 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (783 aa)
ZC3H12AZinc finger CCCH-type containing 12A. (550 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (684 aa)
ANGEL1Angel homolog 1. (667 aa)
DNASE2BDeoxyribonuclease 2 beta. (361 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (848 aa)
SPO11SPO11 initiator of meiotic double stranded breaks. (396 aa)
ATAD5ATPase family AAA domain containing 5. (1831 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
TDP1Tyrosyl-DNA phosphodiesterase 1. (607 aa)
POP5Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (168 aa)
NCBP1Nuclear cap binding protein subunit 1. (764 aa)
REXO1RNA exonuclease 1 homolog. (1231 aa)
TSEN34tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] (311 aa)
CNOT1CCR4-NOT transcription complex subunit 1. (2294 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (987 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2283 aa)
CCDC36Coiled-coil domain containing 36. (580 aa)
ERI3ERI1 exoribonuclease family member 3. (337 aa)
DCLRE1ADNA cross-link repair 1A. (913 aa)
SWT1SWT1 RNA endoribonuclease homolog. (830 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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