116 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDE6H	Phosphodiesterase 6H. (83 aa)
	ENSCPOP00000023932	Uncharacterized protein. (332 aa)
	ENSCPOP00000023917	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (317 aa)
	IQCB1	IQ motif containing B1. (598 aa)
	OPN3	Opsin 3; Belongs to the G-protein coupled receptor 1 family. (399 aa)
	ENSCPOP00000022087	Uncharacterized protein. (161 aa)
	Vcan	Uncharacterized protein. (656 aa)
	MYO7A	Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2203 aa)
	PRPH2	Peripherin 2. (346 aa)
	H0W9J0_CAVPO	Uncharacterized protein. (147 aa)
	MAP1A	Microtubule associated protein 1A. (2915 aa)
	BSG	Basigin (Ok blood group). (384 aa)
	PDE6G	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma; Participates in processes of transmission and amplification of the visual signal. cGMP-PDEs are the effector molecules in G- protein-mediated phototransduction in vertebrate rods and cones (By similarity). (87 aa)
	CACNA1F	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (1774 aa)
	NPHP1	Nephrocystin 1. (662 aa)
	Rpgr	Uncharacterized protein. (645 aa)
	CNGA3	Cyclic nucleotide gated channel subunit alpha 3. (647 aa)
	RGR	Retinal G protein coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (282 aa)
	PDE6B	Phosphodiesterase. (854 aa)
	CNGA1	Cyclic nucleotide gated channel subunit alpha 1. (507 aa)
	IFT52	Intraflagellar transport 52. (406 aa)
	RGS9BP	Regulator of G protein signaling 9 binding protein. (235 aa)
	KIF17	Kinesin family member 17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1011 aa)
	CETN1	Centrin 1. (172 aa)
	RD3	Retinal degeneration 3, GUCY2D regulator. (159 aa)
	ROM1	Retinal outer segment membrane protein 1. (351 aa)
	Tsga10ip	Uncharacterized protein. (193 aa)
	INHA	Inhibin subunit alpha. (405 aa)
	GNAT3	G protein subunit alpha transducin 3. (354 aa)
	Guca1a	Uncharacterized protein. (200 aa)
	SDCCAG8	Serologically defined colon cancer antigen 8. (714 aa)
	ABCA4	ATP binding cassette subfamily A member 4. (2270 aa)
	MAGI2	Membrane associated guanylate kinase, WW and PDZ domain containing 2. (1237 aa)
	NUP42	Nucleoporin 42. (416 aa)
	H0VQQ2_CAVPO	Cyclic nucleotide-binding domain-containing protein. (852 aa)
	TOPORS	TOP1 binding arginine/serine rich protein. (1042 aa)
	Septin2	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (361 aa)
	SAG	S-antigen. (404 aa)
	OCRL	OCRL inositol polyphosphate-5-phosphatase. (900 aa)
	GRK1	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (564 aa)
	CNGB3	Cyclic nucleotide gated channel subunit beta 3. (667 aa)
	RPGRIP1L	RPGRIP1 like. (1260 aa)
	PHLPP2	PH domain and leucine rich repeat protein phosphatase 2. (1292 aa)
	Cetn2	Uncharacterized protein. (172 aa)
	Gnat2	Uncharacterized protein. (354 aa)
	KIF3A	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (728 aa)
	PTPRK	Protein tyrosine phosphatase receptor type K. (1455 aa)
	RAPGEF4	Rap guanine nucleotide exchange factor 4. (989 aa)
	SLC24A4	Solute carrier family 24 member 4; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (605 aa)
	OPN1SW	G_PROTEIN_RECEP_F1_2 domain-containing protein. (346 aa)
	Kifap3	Uncharacterized protein. (671 aa)
	H0VFY3_CAVPO	Uncharacterized protein. (674 aa)
	GUCA1B	Guanylate cyclase activator 1B. (200 aa)
	SHANK2	SH3 and multiple ankyrin repeat domains 2. (1839 aa)
	Cfap410	Uncharacterized protein. (257 aa)
	H0VER4_CAVPO	DAGKc domain-containing protein. (277 aa)
	IFT88	Intraflagellar transport 88. (825 aa)
	PEX6	Peroxisomal biogenesis factor 6. (982 aa)
	GNGT1	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (74 aa)
	ALPK1	Alpha kinase 1. (1117 aa)
	GNAT1	Alpha-transducin. (350 aa)
	IFT57	Intraflagellar transport 57. (429 aa)
	KIAA1549	KIAA1549. (1687 aa)
	PROM1	Prominin 1. (859 aa)
	USH2A	Usherin. (5190 aa)
	PTGS1	Prostaglandin-endoperoxide synthase 1. (553 aa)
	HNF1A	HNF1 homeobox A. (628 aa)
	IMPG1	Interphotoreceptor matrix proteoglycan 1. (730 aa)
	SPATA7	Spermatogenesis associated 7. (588 aa)
	GUCY2F	Guanylate cyclase. (1109 aa)
	MAP1B	Microtubule associated protein 1B. (2465 aa)
	USH1G	USH1 protein network component sans. (462 aa)
	GNB1	Beta-transducin. (340 aa)
	LCA5	Lebercilin LCA5. (659 aa)
	CDHR1	Cadherin related family member 1. (857 aa)
	LOC100716676	TPR_REGION domain-containing protein. (567 aa)
	RHO	Rhodopsin. (348 aa)
	IFT122	Intraflagellar transport 122. (1218 aa)
	PCARE	Photoreceptor cilium actin regulator. (1170 aa)
	WDR19	WD repeat domain 19. (1341 aa)
	RRH	Retinal pigment epithelium-derived rhodopsin homolog; Belongs to the G-protein coupled receptor 1 family. (337 aa)
	H0V266_CAVPO	Uncharacterized protein. (2204 aa)
	Lyar	Uncharacterized protein. (191 aa)
	IFT140	Intraflagellar transport 140. (1463 aa)
	RPGRIP1	RPGR interacting protein 1. (1117 aa)
	FAM161A	FAM161 centrosomal protein A. (686 aa)
	PDE6A	Phosphodiesterase. (860 aa)
	MAK	Male germ cell associated kinase. (622 aa)
	CIB2	Calcium and integrin binding family member 2. (187 aa)
	USH1C	USH1 protein network component harmonin. (909 aa)
	BBS7	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (715 aa)
	MERTK	MER proto-oncogene, tyrosine kinase. (852 aa)
	MYRIP	Myosin VIIA and Rab interacting protein. (830 aa)
	WHRN	Whirlin. (916 aa)
	TTC8	Tetratricopeptide repeat domain 8. (515 aa)
	PDC	Phosducin. (245 aa)
	CEP290	Centrosomal protein 290. (2425 aa)
	RAB27A	RAB27A, member RAS oncogene family. (220 aa)
	PCDH15	Protocadherin related 15. (1913 aa)
	MYO3B	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1306 aa)
	CETN3	Centrin 3. (163 aa)
	ENSCPOP00000030527	Uncharacterized protein. (111 aa)
	ARL3	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family. (189 aa)
	TMEM237	Transmembrane protein 237. (399 aa)
	PRPH	Peripherin; Belongs to the intermediate filament family. (598 aa)
	ENSCPOP00000029356	Uncharacterized protein. (1121 aa)
	ENSCPOP00000028869	Uncharacterized protein. (609 aa)
	STX3	Syntaxin 3; Belongs to the syntaxin family. (288 aa)
	IFT20	Intraflagellar transport 20. (132 aa)
	ENSCPOP00000026472	Uncharacterized protein. (286 aa)
	PRCD	Photoreceptor disc component. (58 aa)
	ENSCPOP00000025708	SH3 domain-containing protein. (146 aa)
	NPHP4	Nephrocystin 4. (1282 aa)
	ENSCPOP00000025137	Uncharacterized protein. (279 aa)
	MYO5A	Myosin VA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1877 aa)
	ATP1A4	Sodium/potassium-transporting ATPase subunit alpha. (1030 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA4	CDHR1	ENSCPOP00000013942	ENSCPOP00000004705	ATP binding cassette subfamily A member 4.	Cadherin related family member 1.	0.402
ABCA4	CNGB3	ENSCPOP00000013942	ENSCPOP00000011652	ATP binding cassette subfamily A member 4.	Cyclic nucleotide gated channel subunit beta 3.	0.639
ABCA4	ENSCPOP00000026472	ENSCPOP00000013942	ENSCPOP00000026472	ATP binding cassette subfamily A member 4.	Uncharacterized protein.	0.425
ABCA4	Gnat2	ENSCPOP00000013942	ENSCPOP00000010358	ATP binding cassette subfamily A member 4.	Uncharacterized protein.	0.403
ABCA4	H0VER4_CAVPO	ENSCPOP00000013942	ENSCPOP00000008521	ATP binding cassette subfamily A member 4.	DAGKc domain-containing protein.	0.423
ABCA4	H0VQQ2_CAVPO	ENSCPOP00000013942	ENSCPOP00000012882	ATP binding cassette subfamily A member 4.	Cyclic nucleotide-binding domain-containing protein.	0.425
ABCA4	PROM1	ENSCPOP00000013942	ENSCPOP00000007064	ATP binding cassette subfamily A member 4.	Prominin 1.	0.403
ABCA4	PRPH2	ENSCPOP00000013942	ENSCPOP00000020574	ATP binding cassette subfamily A member 4.	Peripherin 2.	0.689
ABCA4	RHO	ENSCPOP00000013942	ENSCPOP00000004486	ATP binding cassette subfamily A member 4.	Rhodopsin.	0.469
ABCA4	ROM1	ENSCPOP00000013942	ENSCPOP00000015288	ATP binding cassette subfamily A member 4.	Retinal outer segment membrane protein 1.	0.526
ABCA4	Rpgr	ENSCPOP00000013942	ENSCPOP00000017965	ATP binding cassette subfamily A member 4.	Uncharacterized protein.	0.628
ABCA4	USH2A	ENSCPOP00000013942	ENSCPOP00000007011	ATP binding cassette subfamily A member 4.	Usherin.	0.543
ARL3	BBS7	ENSCPOP00000030497	ENSCPOP00000001110	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.622
ARL3	CEP290	ENSCPOP00000030497	ENSCPOP00000032712	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Centrosomal protein 290.	0.411
ARL3	ENSCPOP00000023932	ENSCPOP00000030497	ENSCPOP00000023932	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.400
ARL3	GNAT1	ENSCPOP00000030497	ENSCPOP00000007345	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Alpha-transducin.	0.446
ARL3	GNAT3	ENSCPOP00000030497	ENSCPOP00000014659	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	G protein subunit alpha transducin 3.	0.400
ARL3	Gnat2	ENSCPOP00000030497	ENSCPOP00000010358	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.400
ARL3	IFT122	ENSCPOP00000030497	ENSCPOP00000004479	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 122.	0.556
ARL3	IFT20	ENSCPOP00000030497	ENSCPOP00000028009	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 20.	0.789