STRINGSTRING
Cln8 Cln8 ARL6IP5 ARL6IP5 SLC7A11 SLC7A11 SLC1A1 SLC1A1 SLC1A2 SLC1A2 KCNJ10 KCNJ10 PSEN1 PSEN1 SLC1A3 SLC1A3 SLC1A6 SLC1A6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cln8CLN8 transmembrane ER and ERGIC protein. (288 aa)
ARL6IP5PRA1 family protein. (188 aa)
SLC7A11Solute carrier family 7 member 11. (507 aa)
SLC1A1Amino acid transporter. (525 aa)
SLC1A2Amino acid transporter. (573 aa)
KCNJ10Potassium voltage-gated channel subfamily J member 10. (379 aa)
PSEN1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (467 aa)
SLC1A3Amino acid transporter. (542 aa)
SLC1A6Amino acid transporter. (560 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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