Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | CNOT1 | ENSCPOP00000032420 | ENSCPOP00000011726 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | CCR4-NOT transcription complex subunit 1. | 0.631 |
| AGO2 | CNOT7 | ENSCPOP00000032420 | ENSCPOP00000023165 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | CCR4-NOT transcription complex subunit 7. | 0.573 |
| AGO2 | CPEB3 | ENSCPOP00000032420 | ENSCPOP00000030830 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Cytoplasmic polyadenylation element binding protein 3. | 0.407 |
| AGO2 | TNRC6B | ENSCPOP00000032420 | ENSCPOP00000027840 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat containing adaptor 6B. | 0.776 |
| AGO2 | TNRC6C | ENSCPOP00000032420 | ENSCPOP00000000413 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat containing adaptor 6C. | 0.963 |
| AGO2 | ZFP36 | ENSCPOP00000032420 | ENSCPOP00000024645 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | ZFP36 ring finger protein. | 0.733 |
| CNOT1 | AGO2 | ENSCPOP00000011726 | ENSCPOP00000032420 | CCR4-NOT transcription complex subunit 1. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.631 |
| CNOT1 | CNOT7 | ENSCPOP00000011726 | ENSCPOP00000023165 | CCR4-NOT transcription complex subunit 1. | CCR4-NOT transcription complex subunit 7. | 0.999 |
| CNOT1 | CPEB3 | ENSCPOP00000011726 | ENSCPOP00000030830 | CCR4-NOT transcription complex subunit 1. | Cytoplasmic polyadenylation element binding protein 3. | 0.433 |
| CNOT1 | NANOS1 | ENSCPOP00000011726 | ENSCPOP00000028942 | CCR4-NOT transcription complex subunit 1. | Nanos C2HC-type zinc finger 1; Belongs to the nanos family. | 0.984 |
| CNOT1 | NANOS2 | ENSCPOP00000011726 | ENSCPOP00000013491 | CCR4-NOT transcription complex subunit 1. | Nanos C2HC-type zinc finger 2; Belongs to the nanos family. | 0.884 |
| CNOT1 | NANOS3 | ENSCPOP00000011726 | ENSCPOP00000015511 | CCR4-NOT transcription complex subunit 1. | Nanos C2HC-type zinc finger 3; Belongs to the nanos family. | 0.808 |
| CNOT1 | TNRC6B | ENSCPOP00000011726 | ENSCPOP00000027840 | CCR4-NOT transcription complex subunit 1. | Trinucleotide repeat containing adaptor 6B. | 0.785 |
| CNOT1 | TNRC6C | ENSCPOP00000011726 | ENSCPOP00000000413 | CCR4-NOT transcription complex subunit 1. | Trinucleotide repeat containing adaptor 6C. | 0.926 |
| CNOT1 | TOB1 | ENSCPOP00000011726 | ENSCPOP00000023944 | CCR4-NOT transcription complex subunit 1. | Transducer of ERBB2, 1. | 0.860 |
| CNOT1 | ZFP36 | ENSCPOP00000011726 | ENSCPOP00000024645 | CCR4-NOT transcription complex subunit 1. | ZFP36 ring finger protein. | 0.963 |
| CNOT1 | ZFP36L1 | ENSCPOP00000011726 | ENSCPOP00000028707 | CCR4-NOT transcription complex subunit 1. | ZFP36 ring finger protein like 1. | 0.773 |
| CNOT1 | ZFP36L2 | ENSCPOP00000011726 | ENSCPOP00000017715 | CCR4-NOT transcription complex subunit 1. | ZFP36 ring finger protein like 2. | 0.773 |
| CNOT7 | AGO2 | ENSCPOP00000023165 | ENSCPOP00000032420 | CCR4-NOT transcription complex subunit 7. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.573 |
| CNOT7 | CNOT1 | ENSCPOP00000023165 | ENSCPOP00000011726 | CCR4-NOT transcription complex subunit 7. | CCR4-NOT transcription complex subunit 1. | 0.999 |
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