18 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIP4K2B	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta. (362 aa)
	PIP4K2A	Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha. (398 aa)
	RAB3GAP2	RAB3 GTPase activating non-catalytic protein subunit 2. (1314 aa)
	ATG2A	Autophagy related 2A. (1904 aa)
	SNX4	Sorting nexin 4. (403 aa)
	SNX30	Sorting nexin family member 30. (493 aa)
	WIPI1	WD repeat domain, phosphoinositide interacting 1. (446 aa)
	PIP4K2C	Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma. (419 aa)
	RAB3GAP1	RAB3 GTPase activating protein catalytic subunit 1. (987 aa)
	RALB	RAS like proto-oncogene B. (206 aa)
	LRSAM1	Leucine rich repeat and sterile alpha motif containing 1. (727 aa)
	ULK1	Unc-51 like autophagy activating kinase 1. (1037 aa)
	SNX18	Sorting nexin. (607 aa)
	KIAA1324	KIAA1324. (1014 aa)
	Wdr45	Uncharacterized protein. (360 aa)
	BECN1	Beclin 1. (448 aa)
	SNX7	Sorting nexin 7. (470 aa)
	SH3GLB1	SH3 domain containing GRB2 like, endophilin B1. (394 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG2A	BECN1	ENSCPOP00000007703	ENSCPOP00000031579	Autophagy related 2A.	Beclin 1.	0.555
ATG2A	ULK1	ENSCPOP00000007703	ENSCPOP00000028112	Autophagy related 2A.	Unc-51 like autophagy activating kinase 1.	0.978
ATG2A	WIPI1	ENSCPOP00000007703	ENSCPOP00000012917	Autophagy related 2A.	WD repeat domain, phosphoinositide interacting 1.	0.980
ATG2A	Wdr45	ENSCPOP00000007703	ENSCPOP00000031128	Autophagy related 2A.	Uncharacterized protein.	0.852
BECN1	ATG2A	ENSCPOP00000031579	ENSCPOP00000007703	Beclin 1.	Autophagy related 2A.	0.555
BECN1	SH3GLB1	ENSCPOP00000031579	ENSCPOP00000032775	Beclin 1.	SH3 domain containing GRB2 like, endophilin B1.	0.652
BECN1	SNX30	ENSCPOP00000031579	ENSCPOP00000010679	Beclin 1.	Sorting nexin family member 30.	0.410
BECN1	SNX7	ENSCPOP00000031579	ENSCPOP00000032611	Beclin 1.	Sorting nexin 7.	0.410
BECN1	ULK1	ENSCPOP00000031579	ENSCPOP00000028112	Beclin 1.	Unc-51 like autophagy activating kinase 1.	0.994
BECN1	WIPI1	ENSCPOP00000031579	ENSCPOP00000012917	Beclin 1.	WD repeat domain, phosphoinositide interacting 1.	0.897
BECN1	Wdr45	ENSCPOP00000031579	ENSCPOP00000031128	Beclin 1.	Uncharacterized protein.	0.540
PIP4K2A	PIP4K2B	ENSCPOP00000006815	ENSCPOP00000004926	Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.	0.911
PIP4K2A	PIP4K2C	ENSCPOP00000006815	ENSCPOP00000014303	Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.	Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.	0.962
PIP4K2B	PIP4K2A	ENSCPOP00000004926	ENSCPOP00000006815	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.	Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.	0.911
PIP4K2B	PIP4K2C	ENSCPOP00000004926	ENSCPOP00000014303	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.	Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.	0.846
PIP4K2C	PIP4K2A	ENSCPOP00000014303	ENSCPOP00000006815	Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.	Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.	0.962
PIP4K2C	PIP4K2B	ENSCPOP00000014303	ENSCPOP00000004926	Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.	0.846
RAB3GAP1	RAB3GAP2	ENSCPOP00000022111	ENSCPOP00000007565	RAB3 GTPase activating protein catalytic subunit 1.	RAB3 GTPase activating non-catalytic protein subunit 2.	0.999
RAB3GAP2	RAB3GAP1	ENSCPOP00000007565	ENSCPOP00000022111	RAB3 GTPase activating non-catalytic protein subunit 2.	RAB3 GTPase activating protein catalytic subunit 1.	0.999
SH3GLB1	BECN1	ENSCPOP00000032775	ENSCPOP00000031579	SH3 domain containing GRB2 like, endophilin B1.	Beclin 1.	0.652