STRINGSTRING
BOP1 BOP1 WDR12 WDR12 HUNK HUNK RSL24D1 RSL24D1 NOL6 NOL6 NOP14 NOP14 MPHOSPH10 MPHOSPH10 UTP6 UTP6 CMSS1 CMSS1 RRP36 RRP36 Pwp2 Pwp2 PES1 PES1 IMP4 IMP4 NOC4L NOC4L IMP3 IMP3 NSA2 NSA2 RRP7A RRP7A WDR36 WDR36 WDR3 WDR3 PES1-2 PES1-2 NOC2L NOC2L BMS1 BMS1 UTP18 UTP18 UTP20 UTP20 Pes1 Pes1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BOP1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (734 aa)
WDR12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
HUNKHormonally up-regulated Neu-associated kinase. (648 aa)
RSL24D1Ribosomal L24 domain containing 1. (163 aa)
NOL6Nucleolar protein 6. (1146 aa)
NOP14NOP14 nucleolar protein. (843 aa)
MPHOSPH10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (681 aa)
UTP6UTP6 small subunit processome component. (596 aa)
CMSS1Cms1 ribosomal small subunit homolog. (279 aa)
RRP36Ribosomal RNA processing 36. (224 aa)
Pwp2Uncharacterized protein. (924 aa)
PES1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (549 aa)
IMP4IMP U3 small nucleolar ribonucleoprotein 4. (210 aa)
NOC4LNucleolar complex associated 4 homolog. (516 aa)
IMP3IMP U3 small nucleolar ribonucleoprotein 3. (184 aa)
NSA2NSA2 ribosome biogenesis factor. (260 aa)
RRP7ARibosomal RNA processing 7 homolog A. (280 aa)
WDR36WD repeat domain 36. (909 aa)
WDR3WD repeat domain 3. (943 aa)
PES1-2Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (563 aa)
NOC2LNOC2 like nucleolar associated transcriptional repressor. (799 aa)
BMS1BMS1 ribosome biogenesis factor. (1277 aa)
UTP18UTP18 small subunit processome component. (540 aa)
UTP20UTP20 small subunit processome component. (2752 aa)
Pes1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (590 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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