STRINGSTRING
NFYC NFYC LOC100734314 LOC100734314 Morf4l1 Morf4l1 MED1 MED1 NFE2 NFE2 GTF2B GTF2B YEATS4 YEATS4 ACTL6A ACTL6A LOC100731150 LOC100731150 MCM2 MCM2 GTF2E1 GTF2E1 TOP1 TOP1 RPA2 RPA2 Chd4 Chd4 EPC2 EPC2 DMRT2 DMRT2 FAN1 FAN1 KDM5A KDM5A PRKDC PRKDC TBX5 TBX5 LOC100735848 LOC100735848 ORC3 ORC3 TNP1 TNP1 Parp1 Parp1 JUND JUND TREX1 TREX1 SAPCD1 SAPCD1 Prim1 Prim1 SUZ12 SUZ12 SP8 SP8 NKX2-5 NKX2-5 DMAP1 DMAP1 ESR2 ESR2 ING3 ING3 POLD2 POLD2 MCM5 MCM5 RAG2 RAG2 GINS2 GINS2 MYOG MYOG CDT1 CDT1 LOC111756490 LOC111756490 H2AZ1 H2AZ1 VPS72 VPS72 RAG1 RAG1 TEAD4 TEAD4 MRGBP MRGBP H3F3B H3F3B SOX12 SOX12 POLD1 POLD1 PAX2 PAX2 MCM7 MCM7 Pold4 Pold4 LOC100713713 LOC100713713 KAT5 KAT5 TCF7L2 TCF7L2 GINS4 GINS4 SP9 SP9 Hhex Hhex IKZF1 IKZF1 LEF1 LEF1 ENSCPOP00000023972 ENSCPOP00000023972 H3-3A H3-3A TRRAP TRRAP LOC100733876 LOC100733876 ENSCPOP00000024347 ENSCPOP00000024347 ENSCPOP00000024428 ENSCPOP00000024428 ENSCPOP00000024582 ENSCPOP00000024582 TBX4 TBX4 ENSCPOP00000024875 ENSCPOP00000024875 GINS3 GINS3 LOC100728325 LOC100728325 Morf4l2 Morf4l2 CDC45 CDC45 STN1 STN1 SRGAP1 SRGAP1 SPHK2 SPHK2 ENSCPOP00000027071 ENSCPOP00000027071 RPA3 RPA3 MEAF6 MEAF6 DBF4 DBF4 GATA1 GATA1 Pold3 Pold3 KDM1B KDM1B DONSON DONSON TMEM232 TMEM232 PRIM2 PRIM2 MCM4 MCM4 IRF4 IRF4 GTF2A1 GTF2A1 NFYB NFYB MPHOSPH8 MPHOSPH8 EPC1 EPC1 POLA1 POLA1 THSD7B THSD7B Pola2 Pola2 DDAH2 DDAH2 CDC5L CDC5L MCM3 MCM3 H2AZ2 H2AZ2 RAD52 RAD52 GINS1 GINS1 H2AC20 H2AC20 ENSCPOP00000029297 ENSCPOP00000029297 CDC6 CDC6 DARS2 DARS2 GLYR1 GLYR1 SMARCAL1 SMARCAL1 TAF10 TAF10 H2BC1 H2BC1 H0VN16_CAVPO H0VN16_CAVPO C19orf53 C19orf53 ENSCPOP00000027965 ENSCPOP00000027965 Ten1 Ten1 NFE2L2 NFE2L2 EYA1 EYA1 LOC100712757 LOC100712757 CENPA CENPA EP400 EP400 MBTD1 MBTD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NFYCNuclear transcription factor Y subunit gamma. (335 aa)
LOC100734314annotation not available (130 aa)
Morf4l1Mortality factor 4 like 1. (377 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1584 aa)
NFE2Nuclear factor, erythroid 2. (373 aa)
GTF2BGeneral transcription factor IIB. (308 aa)
YEATS4YEATS domain containing 4. (227 aa)
ACTL6AActin like 6A; Belongs to the actin family. (429 aa)
LOC100731150annotation not available (103 aa)
MCM2DNA helicase; Belongs to the MCM family. (898 aa)
GTF2E1General transcription factor IIE subunit 1. (440 aa)
TOP1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (768 aa)
RPA2Replication protein A2. (270 aa)
Chd4Uncharacterized protein. (1900 aa)
EPC2Enhancer of polycomb homolog. (803 aa)
DMRT2Doublesex and mab-3 related transcription factor 2. (559 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (987 aa)
KDM5ALysine demethylase 5A. (1527 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4043 aa)
TBX5T-box transcription factor 5. (518 aa)
LOC100735848TINF2_N domain-containing protein. (416 aa)
ORC3Origin recognition complex subunit 3. (710 aa)
TNP1Transition protein 1. (55 aa)
Parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1011 aa)
JUNDJunD proto-oncogene, AP-1 transcription factor subunit. (320 aa)
TREX1Three prime repair exonuclease 1. (314 aa)
SAPCD1Suppressor APC domain containing 1. (163 aa)
Prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (419 aa)
SUZ12SUZ12 polycomb repressive complex 2 subunit. (737 aa)
SP8Sp8 transcription factor. (463 aa)
NKX2-5NK2 homeobox 5. (303 aa)
DMAP1DNA methyltransferase 1 associated protein 1. (445 aa)
ESR2Estrogen receptor 2. (568 aa)
ING3Inhibitor of growth protein. (418 aa)
POLD2DNA polymerase delta 2, accessory subunit. (469 aa)
MCM5DNA helicase; Belongs to the MCM family. (731 aa)
RAG2Recombination activating 2. (527 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
MYOGMyogenin. (249 aa)
CDT1Chromatin licensing and DNA replication factor 1. (549 aa)
LOC111756490Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
VPS72Vacuolar protein sorting 72 homolog. (364 aa)
RAG1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1043 aa)
TEAD4Transcriptional enhancer factor TEF-3; Transcription factor which plays a key role in the Hippo signaling pathway, a pathway involved in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. (450 aa)
MRGBPMRG domain binding protein. (204 aa)
H3F3BHistone H3; Belongs to the histone H3 family. (136 aa)
SOX12Transcription factor SOX. (310 aa)
POLD1DNA polymerase. (1134 aa)
PAX2Paired box 2. (393 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (719 aa)
Pold4Uncharacterized protein. (107 aa)
LOC100713713annotation not available (130 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (541 aa)
TCF7L2Transcription factor 7 like 2. (350 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (223 aa)
SP9Sp9 transcription factor. (374 aa)
HhexHomeobox domain-containing protein. (98 aa)
IKZF1IKAROS family zinc finger 1. (511 aa)
LEF1Lymphoid enhancer binding factor 1. (396 aa)
ENSCPOP00000023972MRG domain-containing protein. (235 aa)
H3-3AH3.3 histone A. (136 aa)
TRRAPTransformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family. (3860 aa)
LOC100733876annotation not available (103 aa)
ENSCPOP00000024347annotation not available (103 aa)
ENSCPOP00000024428PARP-type domain-containing protein. (104 aa)
ENSCPOP00000024582MRG domain-containing protein. (291 aa)
TBX4T-box transcription factor 4. (452 aa)
ENSCPOP00000024875MRG domain-containing protein. (231 aa)
GINS3GINS complex subunit 3. (216 aa)
LOC100728325annotation not available (103 aa)
Morf4l2MRG domain-containing protein. (288 aa)
CDC45Cell division cycle 45. (566 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (375 aa)
SRGAP1SLIT-ROBO Rho GTPase activating protein 1. (1084 aa)
SPHK2Sphingosine kinase 2. (655 aa)
ENSCPOP00000027071annotation not available (130 aa)
RPA3Replication protein A3. (121 aa)
MEAF6MYST/Esa1 associated factor 6. (171 aa)
DBF4DBF4 zinc finger. (675 aa)
GATA1GATA binding protein 1. (401 aa)
Pold3Uncharacterized protein. (466 aa)
KDM1BLysine demethylase 1B. (831 aa)
DONSONDownstream neighbor of SON. (553 aa)
TMEM232Transmembrane protein 232. (607 aa)
PRIM2DNA primase subunit 2. (432 aa)
MCM4DNA helicase; Belongs to the MCM family. (863 aa)
IRF4Interferon regulatory factor 4. (452 aa)
GTF2A1General transcription factor IIA subunit 1. (377 aa)
NFYBNuclear transcription factor Y subunit beta. (206 aa)
MPHOSPH8M-phase phosphoprotein 8. (858 aa)
EPC1Enhancer of polycomb homolog 1. (763 aa)
POLA1DNA polymerase. (1467 aa)
THSD7BThrombospondin type 1 domain containing 7B. (1606 aa)
Pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (598 aa)
DDAH2Dimethylarginine dimethylaminohydrolase 2. (285 aa)
CDC5LCell division cycle 5 like. (802 aa)
MCM3DNA helicase; Belongs to the MCM family. (810 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (129 aa)
RAD52RAD52 homolog, DNA repair protein. (280 aa)
GINS1GINS complex subunit 1. (196 aa)
H2AC20Histone H2A; Belongs to the histone H2A family. (110 aa)
ENSCPOP00000029297annotation not available (103 aa)
CDC6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (579 aa)
DARS2Aspartyl-tRNA synthetase 2, mitochondrial. (654 aa)
GLYR1Glyoxylate reductase 1 homolog. (553 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (938 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (177 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
H0VN16_CAVPOUncharacterized protein. (71 aa)
C19orf53Chromosome 19 open reading frame 53. (99 aa)
ENSCPOP00000027965Bromo domain-containing protein. (321 aa)
Ten1Uncharacterized protein. (122 aa)
NFE2L2Nuclear factor, erythroid 2 like 2. (591 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (592 aa)
LOC100712757TINF2_N domain-containing protein. (397 aa)
CENPACentromere protein A. (131 aa)
EP400E1A binding protein p400. (3128 aa)
MBTD1Mbt domain containing 1. (627 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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