(61 nodes) F-box domain network (Cavia porcellus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FBXO6	F-box protein 6. (284 aa)
	ELOA	Elongin A. (757 aa)
	FBXL18	F-box and leucine rich repeat protein 18. (760 aa)
	FBH1	F-box DNA helicase 1. (1012 aa)
	FBXO39	F-box protein 39. (443 aa)
	FBXO38	F-box protein 38. (1186 aa)
	FBXO2	F-box protein OCP1. (300 aa)
	FBXO41	F-box protein 41. (875 aa)
	FBXL7	F-box and leucine rich repeat protein 7. (491 aa)
	FBXO30	F-box protein 30. (752 aa)
	FBXL6	F-box and leucine rich repeat protein 6. (547 aa)
	Skp2	F-box domain-containing protein. (424 aa)
	FBXO47	F-box protein 47. (416 aa)
	FBXO3	F-box protein 3. (415 aa)
	FBXL2	F-box and leucine rich repeat protein 2. (430 aa)
	FBXO7	F-box protein 7. (524 aa)
	FBXL20	F-box and leucine rich repeat protein 20. (436 aa)
	CCNF	Cyclin F; Belongs to the cyclin family. (778 aa)
	Fbxl8	F-box domain-containing protein. (371 aa)
	FBXO46	F-box protein 46. (602 aa)
	FBXO31	F-box protein 31. (513 aa)
	FBXO10	F-box protein 10. (920 aa)
	FBXL15	F-box and leucine rich repeat protein 15. (300 aa)
	LOC100717006	Uncharacterized protein. (255 aa)
	FBXL14	F-box and leucine rich repeat protein 14. (447 aa)
	FBXL5	F-box and leucine rich repeat protein 5. (691 aa)
	Fbxw12	Uncharacterized protein. (469 aa)
	FBXO36	F-box protein 36. (151 aa)
	FBXO16	F-box protein 16. (313 aa)
	LOC100734543	F-box domain-containing protein. (621 aa)
	FBXL4	F-box and leucine rich repeat protein 4. (600 aa)
	FBXO42	F-box protein 42. (724 aa)
	FBXW2	F-box and WD repeat domain containing 2. (454 aa)
	FBXO4	F-box protein 4. (324 aa)
	FBXO8	F-box protein 8. (319 aa)
	FBXO40	F-box protein 40. (707 aa)
	FBXO28	F-box protein 28. (368 aa)
	FBXW7	F-box and WD repeat domain containing 7. (711 aa)
	FBXL19	F-box and leucine rich repeat protein 19. (674 aa)
	KDM2B	Lysine demethylase 2B. (1306 aa)
	FBXL12	F-box and leucine rich repeat protein 12. (326 aa)
	FBXO34	F-box protein 34. (683 aa)
	FBXW11	F-box and WD repeat domain containing 11. (530 aa)
	FBXO48	F-box protein 48. (155 aa)
	ENSCPOP00000032613	F-box domain-containing protein. (390 aa)
	FBXO45	F-box protein 45. (283 aa)
	FBXO5	F-box protein 5. (450 aa)
	ECT2L	Epithelial cell transforming 2 like. (948 aa)
	KDM2A	Lysine demethylase 2A. (1161 aa)
	FBXW9	F-box and WD repeat domain containing 9. (457 aa)
	FBXO15	F-box protein 15. (530 aa)
	FBXO24	F-box protein 24. (586 aa)
	BTRC	Beta-transducin repeat containing E3 ubiquitin protein ligase. (582 aa)
	FBXW8	F-box and WD repeat domain containing 8. (584 aa)
	FBXL3	F-box and leucine rich repeat protein 3. (427 aa)
	FBXW5	F-box and WD repeat domain containing 5. (565 aa)
	FBXO9	F-box protein 9. (438 aa)
	FBXL13	F-box and leucine rich repeat protein 13. (753 aa)
	Fbxl21p	F-box domain-containing protein. (462 aa)
	FBXO11	F-box protein 11. (911 aa)
	FBXO17	F-box protein 17. (278 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTRC	CCNF	ENSCPOP00000004942	ENSCPOP00000013481	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Cyclin F; Belongs to the cyclin family.	0.616
BTRC	ENSCPOP00000032613	ENSCPOP00000004942	ENSCPOP00000032613	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box domain-containing protein.	0.847
BTRC	FBXL12	ENSCPOP00000004942	ENSCPOP00000028307	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 12.	0.435
BTRC	FBXL13	ENSCPOP00000004942	ENSCPOP00000001247	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 13.	0.435
BTRC	FBXL14	ENSCPOP00000004942	ENSCPOP00000017362	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 14.	0.540
BTRC	FBXL15	ENSCPOP00000004942	ENSCPOP00000015935	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 15.	0.455
BTRC	FBXL19	ENSCPOP00000004942	ENSCPOP00000026753	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 19.	0.400
BTRC	FBXL3	ENSCPOP00000004942	ENSCPOP00000004485	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 3.	0.577
BTRC	FBXL4	ENSCPOP00000004942	ENSCPOP00000021357	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 4.	0.474
BTRC	FBXL6	ENSCPOP00000004942	ENSCPOP00000011963	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 6.	0.444
BTRC	FBXL7	ENSCPOP00000004942	ENSCPOP00000011819	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and leucine rich repeat protein 7.	0.495
BTRC	FBXO16	ENSCPOP00000004942	ENSCPOP00000020150	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box protein 16.	0.546
BTRC	FBXO17	ENSCPOP00000004942	ENSCPOP00000000579	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box protein 17.	0.433
BTRC	FBXO2	ENSCPOP00000004942	ENSCPOP00000011346	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box protein OCP1.	0.867
BTRC	FBXO24	ENSCPOP00000004942	ENSCPOP00000005510	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box protein 24.	0.509
BTRC	FBXO4	ENSCPOP00000004942	ENSCPOP00000022711	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box protein 4.	0.808
BTRC	FBXO5	ENSCPOP00000004942	ENSCPOP00000006920	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box protein 5.	0.931
BTRC	FBXO6	ENSCPOP00000004942	ENSCPOP00000032562	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box protein 6.	0.613
BTRC	FBXO7	ENSCPOP00000004942	ENSCPOP00000013036	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box protein 7.	0.509
BTRC	FBXW11	ENSCPOP00000004942	ENSCPOP00000031139	Beta-transducin repeat containing E3 ubiquitin protein ligase.	F-box and WD repeat domain containing 11.	0.960