(11 nodes) Zinc finger, CXXC-type network (Cavia porcellus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CXXC5	CXXC finger protein 5. (317 aa)
	DNMT1	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1600 aa)
	CXXC1	CXXC finger protein 1. (554 aa)
	TET1	Tet methylcytosine dioxygenase 1. (1976 aa)
	KDM2A	Lysine demethylase 2A. (1161 aa)
	Kmt2a	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (2938 aa)
	KMT2B	Lysine methyltransferase 2B. (2689 aa)
	KDM2B	Lysine demethylase 2B. (1306 aa)
	FBXL19	F-box and leucine rich repeat protein 19. (674 aa)
	MBD1	Methyl-CpG binding domain protein 1. (659 aa)
	TET3	Tet methylcytosine dioxygenase 3. (1805 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CXXC1	KMT2B	ENSCPOP00000018559	ENSCPOP00000003358	CXXC finger protein 1.	Lysine methyltransferase 2B.	0.547
CXXC1	Kmt2a	ENSCPOP00000018559	ENSCPOP00000005242	CXXC finger protein 1.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.547
CXXC5	DNMT1	ENSCPOP00000024627	ENSCPOP00000019013	CXXC finger protein 5.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.570
CXXC5	TET1	ENSCPOP00000024627	ENSCPOP00000008354	CXXC finger protein 5.	Tet methylcytosine dioxygenase 1.	0.704
CXXC5	TET3	ENSCPOP00000024627	ENSCPOP00000022168	CXXC finger protein 5.	Tet methylcytosine dioxygenase 3.	0.704
DNMT1	CXXC5	ENSCPOP00000019013	ENSCPOP00000024627	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	CXXC finger protein 5.	0.570
DNMT1	TET1	ENSCPOP00000019013	ENSCPOP00000008354	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Tet methylcytosine dioxygenase 1.	0.624
DNMT1	TET3	ENSCPOP00000019013	ENSCPOP00000022168	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Tet methylcytosine dioxygenase 3.	0.613
FBXL19	KMT2B	ENSCPOP00000026753	ENSCPOP00000003358	F-box and leucine rich repeat protein 19.	Lysine methyltransferase 2B.	0.441
FBXL19	Kmt2a	ENSCPOP00000026753	ENSCPOP00000005242	F-box and leucine rich repeat protein 19.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.441
KDM2A	KMT2B	ENSCPOP00000006433	ENSCPOP00000003358	Lysine demethylase 2A.	Lysine methyltransferase 2B.	0.502
KDM2A	Kmt2a	ENSCPOP00000006433	ENSCPOP00000005242	Lysine demethylase 2A.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.502
KDM2B	KMT2B	ENSCPOP00000027446	ENSCPOP00000003358	Lysine demethylase 2B.	Lysine methyltransferase 2B.	0.507
KDM2B	Kmt2a	ENSCPOP00000027446	ENSCPOP00000005242	Lysine demethylase 2B.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.550
KMT2B	CXXC1	ENSCPOP00000003358	ENSCPOP00000018559	Lysine methyltransferase 2B.	CXXC finger protein 1.	0.547
KMT2B	FBXL19	ENSCPOP00000003358	ENSCPOP00000026753	Lysine methyltransferase 2B.	F-box and leucine rich repeat protein 19.	0.441
KMT2B	KDM2A	ENSCPOP00000003358	ENSCPOP00000006433	Lysine methyltransferase 2B.	Lysine demethylase 2A.	0.502
KMT2B	KDM2B	ENSCPOP00000003358	ENSCPOP00000027446	Lysine methyltransferase 2B.	Lysine demethylase 2B.	0.507
KMT2B	Kmt2a	ENSCPOP00000003358	ENSCPOP00000005242	Lysine methyltransferase 2B.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.825
Kmt2a	CXXC1	ENSCPOP00000005242	ENSCPOP00000018559	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	CXXC finger protein 1.	0.547