(19 nodes) Leucine-rich repeat, cysteine-containing subtype network (Cavia porcellus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RNH1	Ribonuclease/angiogenin inhibitor 1. (456 aa)
	FBXL16	F-box and leucine rich repeat protein 16. (479 aa)
	FBXL15	F-box and leucine rich repeat protein 15. (300 aa)
	FBXL14	F-box and leucine rich repeat protein 14. (447 aa)
	FBXL5	F-box and leucine rich repeat protein 5. (691 aa)
	LOC100734543	F-box domain-containing protein. (621 aa)
	FBXL4	F-box and leucine rich repeat protein 4. (600 aa)
	LOC101788610	Uncharacterized protein. (119 aa)
	FBXL19	F-box and leucine rich repeat protein 19. (674 aa)
	FBXL20	F-box and leucine rich repeat protein 20. (436 aa)
	AMN1	Antagonist of mitotic exit network 1 homolog. (258 aa)
	ENSCPOP00000032613	F-box domain-containing protein. (390 aa)
	KDM2B	Lysine demethylase 2B. (1306 aa)
	KDM2A	Lysine demethylase 2A. (1161 aa)
	FBXL13	F-box and leucine rich repeat protein 13. (753 aa)
	FBXL2	F-box and leucine rich repeat protein 2. (430 aa)
	Skp2	F-box domain-containing protein. (424 aa)
	FBXL7	F-box and leucine rich repeat protein 7. (491 aa)
	NLRC5	NLR family CARD domain containing 5. (1831 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMN1	ENSCPOP00000032613	ENSCPOP00000028189	ENSCPOP00000032613	Antagonist of mitotic exit network 1 homolog.	F-box domain-containing protein.	0.419
AMN1	Skp2	ENSCPOP00000028189	ENSCPOP00000011977	Antagonist of mitotic exit network 1 homolog.	F-box domain-containing protein.	0.419
ENSCPOP00000032613	AMN1	ENSCPOP00000032613	ENSCPOP00000028189	F-box domain-containing protein.	Antagonist of mitotic exit network 1 homolog.	0.419
ENSCPOP00000032613	FBXL13	ENSCPOP00000032613	ENSCPOP00000001247	F-box domain-containing protein.	F-box and leucine rich repeat protein 13.	0.477
ENSCPOP00000032613	FBXL14	ENSCPOP00000032613	ENSCPOP00000017362	F-box domain-containing protein.	F-box and leucine rich repeat protein 14.	0.544
ENSCPOP00000032613	FBXL15	ENSCPOP00000032613	ENSCPOP00000015935	F-box domain-containing protein.	F-box and leucine rich repeat protein 15.	0.536
ENSCPOP00000032613	FBXL16	ENSCPOP00000032613	ENSCPOP00000013769	F-box domain-containing protein.	F-box and leucine rich repeat protein 16.	0.419
ENSCPOP00000032613	FBXL19	ENSCPOP00000032613	ENSCPOP00000026753	F-box domain-containing protein.	F-box and leucine rich repeat protein 19.	0.547
ENSCPOP00000032613	FBXL2	ENSCPOP00000032613	ENSCPOP00000012484	F-box domain-containing protein.	F-box and leucine rich repeat protein 2.	0.425
ENSCPOP00000032613	FBXL20	ENSCPOP00000032613	ENSCPOP00000013218	F-box domain-containing protein.	F-box and leucine rich repeat protein 20.	0.425
ENSCPOP00000032613	FBXL4	ENSCPOP00000032613	ENSCPOP00000021357	F-box domain-containing protein.	F-box and leucine rich repeat protein 4.	0.459
ENSCPOP00000032613	FBXL7	ENSCPOP00000032613	ENSCPOP00000011819	F-box domain-containing protein.	F-box and leucine rich repeat protein 7.	0.477
ENSCPOP00000032613	KDM2A	ENSCPOP00000032613	ENSCPOP00000006433	F-box domain-containing protein.	Lysine demethylase 2A.	0.575
ENSCPOP00000032613	KDM2B	ENSCPOP00000032613	ENSCPOP00000027446	F-box domain-containing protein.	Lysine demethylase 2B.	0.547
ENSCPOP00000032613	LOC100734543	ENSCPOP00000032613	ENSCPOP00000020777	F-box domain-containing protein.	F-box domain-containing protein.	0.419
ENSCPOP00000032613	LOC101788610	ENSCPOP00000032613	ENSCPOP00000022540	F-box domain-containing protein.	Uncharacterized protein.	0.609
FBXL13	ENSCPOP00000032613	ENSCPOP00000001247	ENSCPOP00000032613	F-box and leucine rich repeat protein 13.	F-box domain-containing protein.	0.477
FBXL13	Skp2	ENSCPOP00000001247	ENSCPOP00000011977	F-box and leucine rich repeat protein 13.	F-box domain-containing protein.	0.477
FBXL14	ENSCPOP00000032613	ENSCPOP00000017362	ENSCPOP00000032613	F-box and leucine rich repeat protein 14.	F-box domain-containing protein.	0.544
FBXL14	Skp2	ENSCPOP00000017362	ENSCPOP00000011977	F-box and leucine rich repeat protein 14.	F-box domain-containing protein.	0.544