STRINGSTRING
PKD1 PKD1 PKDREJ PKDREJ PKD2 PKD2 PKD2L2 PKD2L2 PKD2L1 PKD2L1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PKD1Polycystin 1, transient receptor potential channel interacting. (4283 aa)
PKDREJPolycystin family receptor for egg jelly. (2029 aa)
PKD2Polycystin 2, transient receptor potential cation channel. (839 aa)
PKD2L2Polycystin 2 like 2, transient receptor potential cation channel. (621 aa)
PKD2L1Polycystin 2 like 1, transient receptor potential cation channel. (760 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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