STRINGSTRING
FAM89B FAM89B RPA1 RPA1 GINS1 GINS1 UBA52 UBA52 PSMB8 PSMB8 MCM3 MCM3 PSMB1 PSMB1 PSMB6 PSMB6 MEIOB MEIOB Pola2 Pola2 PSMB9 PSMB9 POLA1 POLA1 UBE2E1 UBE2E1 PSMD13 PSMD13 MCM4 MCM4 ORC6 ORC6 PRIM2 PRIM2 PSMC4 PSMC4 Lig1 Lig1 RFC1 RFC1 POLE2 POLE2 ORC2 ORC2 MCM6 MCM6 CCNE1 CCNE1 ORC1 ORC1 SKP1 SKP1 CDC16 CDC16 MCM9 MCM9 Rps27a Rps27a PSMD6 PSMD6 Pold3 Pold3 MCM10 MCM10 PSMB7 PSMB7 KPNA1 KPNA1 GMNN GMNN DBF4 DBF4 ORC4 ORC4 RFC3 RFC3 RPA2 RPA2 PCNA PCNA MAML1 MAML1 PSMC6 PSMC6 ANAPC2 ANAPC2 PSMD11 PSMD11 CDK2 CDK2 MCM2 MCM2 CDC6 CDC6 CCNA2 CCNA2 CDC23 CDC23 PSMD8 PSMD8 PSMD7 PSMD7 RFC4 RFC4 PSMC5 PSMC5 ANAPC5 ANAPC5 PSME4 PSME4 ATAD5 ATAD5 PSMA8 PSMA8 RFC2 RFC2 CDC7 CDC7 UBE2S UBE2S ANAPC4 ANAPC4 Skp2 Skp2 Ccne2 Ccne2 POLE POLE PSMA5 PSMA5 Anapc11 Anapc11 PSMF1 PSMF1 PSMB5 PSMB5 PSMA7 PSMA7 TM7SF3 TM7SF3 Psmd10 Psmd10 H0VSI3_CAVPO H0VSI3_CAVPO PSMD3 PSMD3 ORC3 ORC3 PSMB4 PSMB4 PSMA1 PSMA1 ANAPC7 ANAPC7 Prim1 Prim1 PSMC2 PSMC2 H0VWS1_CAVPO H0VWS1_CAVPO H0VZC1_CAVPO H0VZC1_CAVPO CUL1 CUL1 RFC5 RFC5 Psmd9 Psmd9 PSMA4 PSMA4 POLD2 POLD2 MCM5 MCM5 GINS2 GINS2 CDT1 CDT1 PSMB3 PSMB3 PSMB11 PSMB11 PSMD5 PSMD5 H0WAD6_CAVPO H0WAD6_CAVPO PSMB10 PSMB10 H0WDT2_CAVPO H0WDT2_CAVPO UBE2D1 UBE2D1 CCNA1 CCNA1 POLD1 POLD1 MCM7 MCM7 POLE4 POLE4 UBE2C UBE2C PSMD1 PSMD1 FAM89A FAM89A Pold4 Pold4 POLE3 POLE3 PSMA3 PSMA3 GINS4 GINS4 DNA2 DNA2 KPNA6 KPNA6 ANAPC10 ANAPC10 ENSCPOP00000023065 ENSCPOP00000023065 FZR1 FZR1 PSME1 PSME1 ORC5 ORC5 PSMC3 PSMC3 GINS3 GINS3 PSMD2 PSMD2 CDC45 CDC45 RBX1 RBX1 Tm4sf19 Tm4sf19 LOC100713990 LOC100713990 KPNB1 KPNB1 RPA3 RPA3 Mcm8 Mcm8 RCBTB2 RCBTB2 CDC26 CDC26 RCBTB1 RCBTB1 PSMD14 PSMD14 PSMD4 PSMD4 ANAPC16 ANAPC16 ANAPC1 ANAPC1 PSMD12 PSMD12 ENSCPOP00000029251 ENSCPOP00000029251 PSMB2 PSMB2 PSMA6 PSMA6 UBB UBB ENSCPOP00000030705 ENSCPOP00000030705 CDC27 CDC27 ANAPC15 ANAPC15 PSMC1 PSMC1 ENSCPOP00000031632 ENSCPOP00000031632 PSME2 PSME2 Ubc Ubc FEN1 FEN1 Psma2 Psma2 PSME3 PSME3 ENSCPOP00000032613 ENSCPOP00000032613
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FAM89BFamily with sequence similarity 89 member B. (189 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
GINS1GINS complex subunit 1. (196 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (232 aa)
PSMB8Proteasome subunit beta. (273 aa)
MCM3DNA helicase; Belongs to the MCM family. (810 aa)
PSMB1Proteasome subunit beta. (241 aa)
PSMB6Proteasome subunit beta. (239 aa)
MEIOBMeiosis specific with OB-fold. (471 aa)
Pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (598 aa)
PSMB9Proteasome subunit beta. (219 aa)
POLA1DNA polymerase. (1467 aa)
UBE2E1Ubiquitin conjugating enzyme E2 E1; Belongs to the ubiquitin-conjugating enzyme family. (193 aa)
PSMD13Proteasome 26S subunit, non-ATPase 13. (315 aa)
MCM4DNA helicase; Belongs to the MCM family. (863 aa)
ORC6Origin recognition complex subunit 6. (293 aa)
PRIM2DNA primase subunit 2. (432 aa)
PSMC4Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (418 aa)
Lig1DNA ligase. (909 aa)
RFC1Replication factor C subunit 1. (1153 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
ORC2Origin recognition complex subunit 2. (577 aa)
MCM6DNA helicase; Belongs to the MCM family. (821 aa)
CCNE1Cyclin E1; Belongs to the cyclin family. (410 aa)
ORC1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (837 aa)
SKP1S-phase kinase-associated protein 1; Essential component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex, which mediates the ubiquitination of proteins involved in cell cycle progression, signal transduction and transcription. In the SCF complex, serves as an adapter that links the F-box protein to CUL1. The functional specificity of the SCF complex depends on the F-box protein as substrate recognition component. SCF(BTRC) and SCF(FBXW11) direct ubiquitination of CTNNB1 and participate in Wnt signaling. SCF(FBXW11) directs ubiquitination of phosphorylated NFKBIA. SCF(BTRC [...] (162 aa)
CDC16Cell division cycle 16. (620 aa)
MCM9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1117 aa)
Rps27aUbiquitin-40S ribosomal protein S27a; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be i [...] (156 aa)
PSMD6Proteasome 26S subunit, non-ATPase 6. (389 aa)
Pold3Uncharacterized protein. (466 aa)
MCM10Minichromosome maintenance 10 replication initiation factor. (834 aa)
PSMB7Proteasome subunit beta. (277 aa)
KPNA1Importin subunit alpha; Functions in nuclear protein import. (538 aa)
GMNNGeminin DNA replication inhibitor. (209 aa)
DBF4DBF4 zinc finger. (675 aa)
ORC4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (419 aa)
RFC3Replication factor C subunit 3. (220 aa)
RPA2Replication protein A2. (270 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
MAML1Mastermind like transcriptional coactivator 1. (794 aa)
PSMC6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
ANAPC2Anaphase promoting complex subunit 2; Belongs to the cullin family. (827 aa)
PSMD11Proteasome 26S subunit, non-ATPase 11. (422 aa)
CDK2Cyclin dependent kinase 2; Belongs to the protein kinase superfamily. (346 aa)
MCM2DNA helicase; Belongs to the MCM family. (898 aa)
CDC6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (579 aa)
CCNA2Cyclin A2; Belongs to the cyclin family. (429 aa)
CDC23Cell division cycle 23. (597 aa)
PSMD8Proteasome 26S subunit, non-ATPase 8. (350 aa)
PSMD7Proteasome 26S subunit, non-ATPase 7. (322 aa)
RFC4Replication factor C subunit 4. (363 aa)
PSMC5Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
ANAPC5Anaphase promoting complex subunit 5. (755 aa)
PSME4Proteasome activator subunit 4. (1827 aa)
ATAD5ATPase family AAA domain containing 5. (1831 aa)
PSMA8Proteasome subunit alpha type. (250 aa)
RFC2Replication factor C subunit 2. (352 aa)
CDC7Cell division cycle 7. (560 aa)
UBE2SUbiquitin conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (214 aa)
ANAPC4Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family. (809 aa)
Skp2F-box domain-containing protein. (424 aa)
Ccne2Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (405 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2283 aa)
PSMA5Proteasome subunit alpha type. (241 aa)
Anapc11RING-type domain-containing protein. (84 aa)
PSMF1Proteasome inhibitor subunit 1. (271 aa)
PSMB5Proteasome subunit beta. (263 aa)
PSMA7Proteasome endopeptidase complex. (248 aa)
TM7SF3Transmembrane 7 superfamily member 3. (570 aa)
Psmd10ANK_REP_REGION domain-containing protein. (232 aa)
H0VSI3_CAVPODNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (677 aa)
PSMD3Proteasome 26S subunit, non-ATPase 3. (534 aa)
ORC3Origin recognition complex subunit 3. (710 aa)
PSMB4Proteasome subunit beta; Belongs to the peptidase T1B family. (263 aa)
PSMA1Proteasome subunit alpha type. (270 aa)
ANAPC7Anaphase promoting complex subunit 7. (555 aa)
Prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (419 aa)
PSMC2Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (458 aa)
H0VWS1_CAVPOANK_REP_REGION domain-containing protein. (213 aa)
H0VZC1_CAVPOUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (199 aa)
CUL1Cullin 1; Belongs to the cullin family. (776 aa)
RFC5Replication factor C subunit 5. (340 aa)
Psmd9PDZ domain-containing protein. (223 aa)
PSMA4Proteasome subunit alpha type. (261 aa)
POLD2DNA polymerase delta 2, accessory subunit. (469 aa)
MCM5DNA helicase; Belongs to the MCM family. (731 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
CDT1Chromatin licensing and DNA replication factor 1. (549 aa)
PSMB3Proteasome subunit beta. (207 aa)
PSMB11Proteasome subunit beta. (297 aa)
PSMD5Proteasome 26S subunit, non-ATPase 5. (504 aa)
H0WAD6_CAVPOUbiquitin-like domain-containing protein. (111 aa)
PSMB10Proteasome subunit beta. (273 aa)
H0WDT2_CAVPOUbiquitin-like domain-containing protein. (127 aa)
UBE2D1Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (139 aa)
CCNA1Cyclin A1; Belongs to the cyclin family. (420 aa)
POLD1DNA polymerase. (1134 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (719 aa)
POLE4DNA polymerase epsilon 4, accessory subunit. (116 aa)
UBE2CUbiquitin conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
PSMD126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (953 aa)
FAM89AFamily with sequence similarity 89 member A. (174 aa)
Pold4Uncharacterized protein. (107 aa)
POLE3DNA polymerase epsilon 3, accessory subunit. (147 aa)
PSMA3Proteasome subunit alpha type. (255 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (223 aa)
DNA2DNA replication helicase/nuclease 2. (1021 aa)
KPNA6Importin subunit alpha; Functions in nuclear protein import. (536 aa)
ANAPC10Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (185 aa)
ENSCPOP00000023065ANK_REP_REGION domain-containing protein. (179 aa)
FZR1Fizzy and cell division cycle 20 related 1. (493 aa)
PSME1Proteasome activator subunit 1. (249 aa)
ORC5Origin recognition complex subunit 5. (414 aa)
PSMC3Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (446 aa)
GINS3GINS complex subunit 3. (216 aa)
PSMD226S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (908 aa)
CDC45Cell division cycle 45. (566 aa)
RBX1Ring-box 1. (108 aa)
Tm4sf19Uncharacterized protein. (232 aa)
LOC100713990Histone H2B; Belongs to the histone H2B family. (126 aa)
KPNB1Karyopherin subunit beta 1. (876 aa)
RPA3Replication protein A3. (121 aa)
Mcm8MCM domain-containing protein; Belongs to the MCM family. (833 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (551 aa)
CDC26Cell division cycle 26. (85 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
PSMD14Proteasome 26S subunit, non-ATPase 14. (310 aa)
PSMD4Proteasome 26S subunit, non-ATPase 4. (377 aa)
ANAPC16Anaphase promoting complex subunit 16. (118 aa)
ANAPC1Anaphase promoting complex subunit 1. (1941 aa)
PSMD12Proteasome 26S subunit, non-ATPase 12. (456 aa)
ENSCPOP00000029251Uncharacterized protein; Belongs to the SKP1 family. (147 aa)
PSMB2Proteasome subunit beta. (201 aa)
PSMA6Proteasome subunit alpha type. (246 aa)
UBBPolyubiquitin-B; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...] (229 aa)
ENSCPOP00000030705CYCLIN domain-containing protein; Belongs to the cyclin family. (341 aa)
CDC27Cell division cycle 27. (825 aa)
ANAPC15Anaphase promoting complex subunit 15. (134 aa)
PSMC1Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family. (440 aa)
ENSCPOP00000031632Ubiquitin-like domain-containing protein. (141 aa)
PSME2Proteasome activator subunit 2. (239 aa)
UbcUncharacterized protein. (159 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
Psma2Proteasome subunit alpha type. (234 aa)
PSME3Proteasome activator subunit 3. (254 aa)
ENSCPOP00000032613F-box domain-containing protein. (390 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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