STRINGSTRING
WRN WRN CTC1 CTC1 PRIM2 PRIM2 CENPN CENPN Lig1 Lig1 RFC1 RFC1 Hjurp Hjurp RSF1 RSF1 CENPO CENPO LOC100731490 LOC100731490 CENPK CENPK Pold3 Pold3 PPP6R3 PPP6R3 RBPMS2 RBPMS2 ATRX ATRX PIF1 PIF1 CENPQ CENPQ RFC3 RFC3 RPA2 RPA2 DKC1 DKC1 RPA1 RPA1 H2AZ2 H2AZ2 CENPP CENPP CENPT CENPT MEIOB MEIOB BLM BLM PCNA PCNA RUVBL1 RUVBL1 TERF1 TERF1 CDK2 CDK2 EXD2 EXD2 CHTF18 CHTF18 CCNA2 CCNA2 ACD ACD RFC4 RFC4 SHQ1 SHQ1 RFC2 RFC2 H2BC1 H2BC1 CENPM CENPM SMARCA1 SMARCA1 PPP6R2 PPP6R2 Rtel1 Rtel1 LOC100735848 LOC100735848 H0VSI3_CAVPO H0VSI3_CAVPO Rbbp4 Rbbp4 TERT TERT RECQL4 RECQL4 Prim1 Prim1 MIS18A MIS18A LOC100728920 LOC100728920 RFC5 RFC5 H2AJ H2AJ ENSCPOP00000026646 ENSCPOP00000026646 ENSCPOP00000026400 ENSCPOP00000026400 ENSCPOP00000026334 ENSCPOP00000026334 DAXX DAXX RBBP7 RBBP7 LOC100713990 LOC100713990 CENPS CENPS HIST2H2AA3 HIST2H2AA3 ENSCPOP00000025561 ENSCPOP00000025561 STN1 STN1 PPP6C PPP6C ANKRD66 ANKRD66 LOC100728325 LOC100728325 H2BC18 H2BC18 ENSCPOP00000024383 ENSCPOP00000024383 HIST2H2BE HIST2H2BE ENSCPOP00000024347 ENSCPOP00000024347 ENSCPOP00000024311 ENSCPOP00000024311 LOC100733876 LOC100733876 CENPU CENPU ENSCPOP00000023894 ENSCPOP00000023894 LOC100717510 LOC100717510 Cenpx Cenpx NOP10 NOP10 CENPW CENPW DNA2 DNA2 Pold4 Pold4 LOC100735546 LOC100735546 LOC111756489 LOC111756489 Trub1 Trub1 POLD1 POLD1 CCNA1 CCNA1 LOC100722162 LOC100722162 LOC100724929 LOC100724929 H2AZ1 H2AZ1 RUVBL2 RUVBL2 LOC100735042 LOC100735042 LOC111756490 LOC111756490 H0W6R4_CAVPO H0W6R4_CAVPO ENSCPOP00000026982 ENSCPOP00000026982 ANKRD44 ANKRD44 POLD2 POLD2 OIP5 OIP5 TERF2IP TERF2IP Pola2 Pola2 CENPC CENPC POLA1 POLA1 SMARCA5 SMARCA5 WRAP53 WRAP53 LOC100731150 LOC100731150 ENSCPOP00000032251 ENSCPOP00000032251 FEN1 FEN1 KNL1 KNL1 TERF2 TERF2 LOC106027456 LOC106027456 ENSCPOP00000030815 ENSCPOP00000030815 POT1 POT1 ENSCPOP00000030090 ENSCPOP00000030090 ANKRD28 ANKRD28 ITGB3BP ITGB3BP CENPH CENPH ENSCPOP00000029297 ENSCPOP00000029297 ENSCPOP00000029061 ENSCPOP00000029061 CENPA CENPA LOC100712757 LOC100712757 CENPL CENPL NHP2 NHP2 Ten1 Ten1 RCBTB1 RCBTB1 ENSCPOP00000027781 ENSCPOP00000027781 RCBTB2 RCBTB2 MIS18BP1 MIS18BP1 RPA3 RPA3 GAR1 GAR1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WRNWRN RecQ like helicase. (1462 aa)
CTC1CST telomere replication complex component 1. (1206 aa)
PRIM2DNA primase subunit 2. (432 aa)
CENPNCentromere protein N. (345 aa)
Lig1DNA ligase. (909 aa)
RFC1Replication factor C subunit 1. (1153 aa)
HjurpUncharacterized protein. (696 aa)
RSF1Remodeling and spacing factor 1. (1433 aa)
CENPOCentromere protein O. (297 aa)
LOC100731490Uncharacterized protein. (740 aa)
CENPKCentromere protein K. (268 aa)
Pold3Uncharacterized protein. (466 aa)
PPP6R3Protein phosphatase 6 regulatory subunit 3. (872 aa)
RBPMS2RNA binding protein, mRNA processing factor 2. (178 aa)
ATRXATRX chromatin remodeler. (2481 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (463 aa)
CENPQCentromere protein Q. (264 aa)
RFC3Replication factor C subunit 3. (220 aa)
RPA2Replication protein A2. (270 aa)
DKC1Dyskerin pseudouridine synthase 1. (513 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (129 aa)
CENPPCentromere protein P. (283 aa)
CENPTCentromere protein T. (497 aa)
MEIOBMeiosis specific with OB-fold. (471 aa)
BLMBLM RecQ like helicase. (1405 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (409 aa)
CDK2Cyclin dependent kinase 2; Belongs to the protein kinase superfamily. (346 aa)
EXD2Exonuclease 3'-5' domain containing 2. (619 aa)
CHTF18Chromosome transmission fidelity factor 18. (988 aa)
CCNA2Cyclin A2; Belongs to the cyclin family. (429 aa)
ACDACD shelterin complex subunit and telomerase recruitment factor. (421 aa)
RFC4Replication factor C subunit 4. (363 aa)
SHQ1SHQ1, H/ACA ribonucleoprotein assembly factor. (585 aa)
RFC2Replication factor C subunit 2. (352 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
CENPMCentromere protein M. (180 aa)
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1056 aa)
PPP6R2Protein phosphatase 6 regulatory subunit 2. (942 aa)
Rtel1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1246 aa)
LOC100735848TINF2_N domain-containing protein. (416 aa)
H0VSI3_CAVPODNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (677 aa)
Rbbp4WD_REPEATS_REGION domain-containing protein. (425 aa)
TERTTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nuc [...] (1018 aa)
RECQL4RecQ like helicase 4. (1226 aa)
Prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (419 aa)
MIS18AMIS18 kinetochore protein A. (243 aa)
LOC100728920Histone domain-containing protein; Belongs to the histone H2B family. (128 aa)
RFC5Replication factor C subunit 5. (340 aa)
H2AJHistone H2A; Belongs to the histone H2A family. (129 aa)
ENSCPOP00000026646annotation not available (126 aa)
ENSCPOP00000026400annotation not available (125 aa)
ENSCPOP00000026334WD_REPEATS_REGION domain-containing protein. (385 aa)
DAXXDeath domain associated protein. (756 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (469 aa)
LOC100713990Histone H2B; Belongs to the histone H2B family. (126 aa)
CENPSCentromere protein S. (135 aa)
HIST2H2AA3Histone H2A; Belongs to the histone H2A family. (130 aa)
ENSCPOP00000025561Histone H2A; Belongs to the histone H2A family. (72 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (375 aa)
PPP6CSerine/threonine-protein phosphatase. (305 aa)
ANKRD66Ankyrin repeat domain 66. (225 aa)
LOC100728325annotation not available (103 aa)
H2BC18Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSCPOP00000024383annotation not available (126 aa)
HIST2H2BEHistone H2B; Belongs to the histone H2B family. (126 aa)
ENSCPOP00000024347annotation not available (103 aa)
ENSCPOP00000024311annotation not available (126 aa)
LOC100733876annotation not available (103 aa)
CENPUCentromere protein U. (405 aa)
ENSCPOP00000023894annotation not available (126 aa)
LOC100717510Histone H2B; Belongs to the histone H2B family. (126 aa)
CenpxUncharacterized protein. (79 aa)
NOP10NOP10 ribonucleoprotein. (64 aa)
CENPWCentromere protein W. (88 aa)
DNA2DNA replication helicase/nuclease 2. (1021 aa)
Pold4Uncharacterized protein. (107 aa)
LOC100735546Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC111756489Histone H2A; Belongs to the histone H2A family. (130 aa)
Trub1TruB_N domain-containing protein. (244 aa)
POLD1DNA polymerase. (1134 aa)
CCNA1Cyclin A1; Belongs to the cyclin family. (420 aa)
LOC100722162Histone H2A; Belongs to the histone H2A family. (111 aa)
LOC100724929Histone H2A; Belongs to the histone H2A family. (117 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (486 aa)
LOC100735042Histone domain-containing protein; Belongs to the histone H2B family. (125 aa)
LOC111756490Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
H0W6R4_CAVPOWD_REPEATS_REGION domain-containing protein. (418 aa)
ENSCPOP00000026982annotation not available (130 aa)
ANKRD44Ankyrin repeat domain 44. (997 aa)
POLD2DNA polymerase delta 2, accessory subunit. (469 aa)
OIP5Opa interacting protein 5. (234 aa)
TERF2IPTERF2 interacting protein. (371 aa)
Pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (598 aa)
CENPCCentromere protein C. (942 aa)
POLA1DNA polymerase. (1467 aa)
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1051 aa)
WRAP53WD repeat containing antisense to TP53. (541 aa)
LOC100731150annotation not available (103 aa)
ENSCPOP00000032251annotation not available (130 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
KNL1Kinetochore scaffold 1. (2185 aa)
TERF2Telomeric repeat binding factor 2. (542 aa)
LOC106027456annotation not available (126 aa)
ENSCPOP00000030815CAF1C_H4-bd domain-containing protein. (54 aa)
POT1Protection of telomeres 1. (652 aa)
ENSCPOP00000030090annotation not available (126 aa)
ANKRD28Ankyrin repeat domain 28. (1085 aa)
ITGB3BPIntegrin subunit beta 3 binding protein. (198 aa)
CENPHCentromere protein H. (277 aa)
ENSCPOP00000029297annotation not available (103 aa)
ENSCPOP00000029061annotation not available (126 aa)
CENPACentromere protein A. (131 aa)
LOC100712757TINF2_N domain-containing protein. (397 aa)
CENPLCentromere protein L. (346 aa)
NHP2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (153 aa)
Ten1Uncharacterized protein. (122 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
ENSCPOP00000027781TruB_N domain-containing protein. (257 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (551 aa)
MIS18BP1MIS18 binding protein 1. (1127 aa)
RPA3Replication protein A3. (121 aa)
GAR1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (222 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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