22 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALDH5A1	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (472 aa)
	RAB3A	RAB3A, member RAS oncogene family. (220 aa)
	Vamp2	V-SNARE coiled-coil homology domain-containing protein. (164 aa)
	STXBP1	Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	CPLX2	Complexin 2. (134 aa)
	Rims1	C2 domain-containing protein. (219 aa)
	RIMS3	Regulating synaptic membrane exocytosis 3. (308 aa)
	STX1A	Syntaxin 1A; Belongs to the syntaxin family. (288 aa)
	DNAJC5B	DnaJ heat shock protein family (Hsp40) member C5 beta. (198 aa)
	GAD1	Glutamate decarboxylase 1. (594 aa)
	RIMS2	Regulating synaptic membrane exocytosis 2. (1410 aa)
	SLC6A11	Solute carrier family 6 member 11. (640 aa)
	SLC32A1	Solute carrier family 32 member 1. (526 aa)
	GAD2	Glutamate decarboxylase 2. (585 aa)
	SLC6A13	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (601 aa)
	SLC6A1	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (589 aa)
	SLC6A12	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (611 aa)
	DNAJC5	DnaJ heat shock protein family (Hsp40) member C5. (198 aa)
	ABAT	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (500 aa)
	CPLX1	Complexin 1. (134 aa)
	SYT1	Synaptotagmin 1. (422 aa)
	SNAP25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (205 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABAT	ALDH5A1	ENSCPOP00000025444	ENSCPOP00000026312	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.978
ABAT	GAD1	ENSCPOP00000025444	ENSCPOP00000003750	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamate decarboxylase 1.	0.948
ABAT	GAD2	ENSCPOP00000025444	ENSCPOP00000012362	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamate decarboxylase 2.	0.875
ALDH5A1	ABAT	ENSCPOP00000026312	ENSCPOP00000025444	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.978
ALDH5A1	GAD1	ENSCPOP00000026312	ENSCPOP00000003750	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Glutamate decarboxylase 1.	0.813
ALDH5A1	GAD2	ENSCPOP00000026312	ENSCPOP00000012362	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Glutamate decarboxylase 2.	0.740
CPLX1	CPLX2	ENSCPOP00000026157	ENSCPOP00000026925	Complexin 1.	Complexin 2.	0.827
CPLX1	GAD1	ENSCPOP00000026157	ENSCPOP00000003750	Complexin 1.	Glutamate decarboxylase 1.	0.435
CPLX1	RAB3A	ENSCPOP00000026157	ENSCPOP00000029051	Complexin 1.	RAB3A, member RAS oncogene family.	0.505
CPLX1	RIMS2	ENSCPOP00000026157	ENSCPOP00000006566	Complexin 1.	Regulating synaptic membrane exocytosis 2.	0.606
CPLX1	RIMS3	ENSCPOP00000026157	ENSCPOP00000001428	Complexin 1.	Regulating synaptic membrane exocytosis 3.	0.578
CPLX1	Rims1	ENSCPOP00000026157	ENSCPOP00000026837	Complexin 1.	C2 domain-containing protein.	0.606
CPLX1	SLC32A1	ENSCPOP00000026157	ENSCPOP00000007746	Complexin 1.	Solute carrier family 32 member 1.	0.536
CPLX1	SNAP25	ENSCPOP00000026157	ENSCPOP00000002616	Complexin 1.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.996
CPLX1	STX1A	ENSCPOP00000026157	ENSCPOP00000003060	Complexin 1.	Syntaxin 1A; Belongs to the syntaxin family.	0.970
CPLX1	STXBP1	ENSCPOP00000026157	ENSCPOP00000026637	Complexin 1.	Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.705
CPLX1	SYT1	ENSCPOP00000026157	ENSCPOP00000001859	Complexin 1.	Synaptotagmin 1.	0.978
CPLX1	Vamp2	ENSCPOP00000026157	ENSCPOP00000030703	Complexin 1.	V-SNARE coiled-coil homology domain-containing protein.	0.980
CPLX2	CPLX1	ENSCPOP00000026925	ENSCPOP00000026157	Complexin 2.	Complexin 1.	0.827
CPLX2	DNAJC5	ENSCPOP00000026925	ENSCPOP00000024123	Complexin 2.	DnaJ heat shock protein family (Hsp40) member C5.	0.400