STRINGSTRING
APOA1 APOA1 SMPDL3A SMPDL3A LOC100728240 LOC100728240 ABCA1 ABCA1 ZDHHC19 ZDHHC19 ZDHHC8 ZDHHC8 A2M A2M PTCHD4 PTCHD4 Mug1 Mug1 PTCHD3 PTCHD3 PLEKHD1 PLEKHD1 PRKACB PRKACB PTCHD1 PTCHD1 BMP1 BMP1 Prkaca Prkaca
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APOA1Truncated apolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). As part of the SPAP complex, activates spermatozoa motility; Belongs to the apolipoprotein A1/A4/E family. (264 aa)
SMPDL3ASphingomyelin phosphodiesterase acid like 3A. (410 aa)
LOC100728240Uncharacterized protein. (1366 aa)
ABCA1ATP binding cassette subfamily A member 1. (2200 aa)
ZDHHC19Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (320 aa)
ZDHHC8Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (751 aa)
A2MAlpha-2-macroglobulin. (1475 aa)
PTCHD4Patched domain containing 4. (895 aa)
Mug1Uncharacterized protein. (1377 aa)
PTCHD3Patched domain containing 3. (813 aa)
PLEKHD1Pleckstrin homology and coiled-coil domain containing D1. (506 aa)
PRKACBProtein kinase cAMP-activated catalytic subunit beta; Belongs to the protein kinase superfamily. (398 aa)
PTCHD1Patched domain containing 1. (888 aa)
BMP1Metalloendopeptidase. (986 aa)
PrkacaUncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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