28 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MSN	Moesin. (577 aa)
	SNX2	Sorting nexin 2. (519 aa)
	CD63	Tetraspanin. (238 aa)
	SNX5	Sorting nexin; Involved in several stages of intracellular trafficking. (404 aa)
	AMPH	Amphiphysin. (680 aa)
	CTTN	Cortactin. (550 aa)
	VPS35	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (797 aa)
	Vti1b	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	STX8	Syntaxin 8. (236 aa)
	VAMP8	Vesicle associated membrane protein 8. (101 aa)
	SNX1	Sorting nexin 1. (521 aa)
	EZR	Ezrin. (586 aa)
	SNX3	Sorting nexin 3. (104 aa)
	STX17	Syntaxin 17; Belongs to the syntaxin family. (301 aa)
	CDC42	Cell division cycle 42. (191 aa)
	VPS26B	VPS26, retromer complex component B. (336 aa)
	RHOA	Ras homolog family member A. (193 aa)
	SNX6	Sorting nexin; Involved in several stages of intracellular trafficking. (406 aa)
	STX7	Syntaxin 7; Belongs to the syntaxin family. (278 aa)
	SNX27	Sorting nexin 27. (541 aa)
	TFRC	Transferrin receptor protein 1. (765 aa)
	VPS26A	VPS26, retromer complex component A. (354 aa)
	STX5	Syntaxin 5; Belongs to the syntaxin family. (355 aa)
	RDX	Radixin. (604 aa)
	VAMP7	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (210 aa)
	LAMP1	Lysosomal associated membrane protein 1. (410 aa)
	EEA1	Early endosome antigen 1. (1377 aa)
	VASP	Vasodilator stimulated phosphoprotein; Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance, lamellipodial and filopodial dynamics, platelet activation and cell migration. Belongs to the Ena/VASP family. (376 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMPH	CTTN	ENSCPOP00000005833	ENSCPOP00000005010	Amphiphysin.	Cortactin.	0.496
AMPH	EEA1	ENSCPOP00000005833	ENSCPOP00000013072	Amphiphysin.	Early endosome antigen 1.	0.418
AMPH	SNX1	ENSCPOP00000005833	ENSCPOP00000000224	Amphiphysin.	Sorting nexin 1.	0.695
AMPH	SNX2	ENSCPOP00000005833	ENSCPOP00000009065	Amphiphysin.	Sorting nexin 2.	0.763
AMPH	SNX3	ENSCPOP00000005833	ENSCPOP00000032950	Amphiphysin.	Sorting nexin 3.	0.425
AMPH	SNX5	ENSCPOP00000005833	ENSCPOP00000007119	Amphiphysin.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.645
AMPH	SNX6	ENSCPOP00000005833	ENSCPOP00000030526	Amphiphysin.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.511
AMPH	VPS26A	ENSCPOP00000005833	ENSCPOP00000025802	Amphiphysin.	VPS26, retromer complex component A.	0.462
AMPH	VPS26B	ENSCPOP00000005833	ENSCPOP00000031446	Amphiphysin.	VPS26, retromer complex component B.	0.475
AMPH	VPS35	ENSCPOP00000005833	ENSCPOP00000003407	Amphiphysin.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.419
CD63	EEA1	ENSCPOP00000008209	ENSCPOP00000013072	Tetraspanin.	Early endosome antigen 1.	0.711
CD63	LAMP1	ENSCPOP00000008209	ENSCPOP00000015749	Tetraspanin.	Lysosomal associated membrane protein 1.	0.820
CD63	TFRC	ENSCPOP00000008209	ENSCPOP00000026959	Tetraspanin.	Transferrin receptor protein 1.	0.451
CDC42	CTTN	ENSCPOP00000031577	ENSCPOP00000005010	Cell division cycle 42.	Cortactin.	0.727
CDC42	EZR	ENSCPOP00000031577	ENSCPOP00000032958	Cell division cycle 42.	Ezrin.	0.752
CDC42	MSN	ENSCPOP00000031577	ENSCPOP00000031240	Cell division cycle 42.	Moesin.	0.759
CDC42	RDX	ENSCPOP00000031577	ENSCPOP00000022333	Cell division cycle 42.	Radixin.	0.723
CDC42	RHOA	ENSCPOP00000031577	ENSCPOP00000031238	Cell division cycle 42.	Ras homolog family member A.	0.973
CDC42	STX5	ENSCPOP00000031577	ENSCPOP00000025021	Cell division cycle 42.	Syntaxin 5; Belongs to the syntaxin family.	0.512
CDC42	TFRC	ENSCPOP00000031577	ENSCPOP00000026959	Cell division cycle 42.	Transferrin receptor protein 1.	0.561