STRINGSTRING
GGA2 GGA2 STX17 STX17 LOC100725073 LOC100725073 ARFGAP2 ARFGAP2 SSR1 SSR1 RAB3D RAB3D BECN1 BECN1 CDC42 CDC42 MSN MSN RHOA RHOA EPS15 EPS15 EPHA2 EPHA2 TSG101 TSG101 ARF1 ARF1 ULK1 ULK1 RAB1B RAB1B CLTB CLTB PLEKHM1 PLEKHM1 NUMB NUMB SPCS1 SPCS1 Arf4 Arf4 GAK GAK CLTCL1 CLTCL1 HM13 HM13 PIKFYVE PIKFYVE DIAPH1 DIAPH1 SAR1A SAR1A CLDN1 CLDN1 AP2M1 AP2M1 VAMP1 VAMP1 EZR EZR RDX RDX CYTH3 CYTH3 SSR3 SSR3 SAR1B SAR1B ATG12 ATG12 RAB11A RAB11A SRC SRC SSR2 SSR2 ARPC1B ARPC1B Rab13 Rab13 GGA1 GGA1 HGS HGS SOCS1 SOCS1 EPN3 EPN3 LAMP1 LAMP1 RPL31 RPL31 SEC13 SEC13 WIPI1 WIPI1 STT3B STT3B ATG5 ATG5 ROCK2 ROCK2 ROCK1 ROCK1 CD81 CD81 ULK2 ULK2 STAM STAM Epn1 Epn1 Dab2 Dab2 ARF6 ARF6 AXL AXL APOE APOE HIP1R HIP1R NPC1 NPC1 OSBP OSBP ERBB2 ERBB2 TBC1D20 TBC1D20 DGAT1 DGAT1 PRKD1 PRKD1 RAB8B RAB8B VTA1 VTA1 WIPI2 WIPI2 SNAP29 SNAP29 RAB6A RAB6A SEC63 SEC63 GGA3 GGA3 LIMK1 LIMK1 NEDD4 NEDD4 RAB11FIP2 RAB11FIP2 EGFR EGFR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GGA2Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (617 aa)
STX17Syntaxin 17; Belongs to the syntaxin family. (301 aa)
LOC100725073PID domain-containing protein. (745 aa)
ARFGAP2ADP ribosylation factor GTPase activating protein 2. (533 aa)
SSR1Signal sequence receptor subunit 1. (291 aa)
RAB3DRAB3D, member RAS oncogene family. (219 aa)
BECN1Beclin 1. (448 aa)
CDC42Cell division cycle 42. (191 aa)
MSNMoesin. (577 aa)
RHOARas homolog family member A. (193 aa)
EPS15Epidermal growth factor receptor pathway substrate 15. (935 aa)
EPHA2EPH receptor A2. (976 aa)
TSG101Tumor susceptibility 101. (391 aa)
ARF1ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)
ULK1Unc-51 like autophagy activating kinase 1. (1037 aa)
RAB1BRAB1B, member RAS oncogene family. (229 aa)
CLTBClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (229 aa)
PLEKHM1Pleckstrin homology and RUN domain containing M1. (1060 aa)
NUMBNUMB endocytic adaptor protein. (648 aa)
SPCS1Signal peptidase complex subunit 1. (102 aa)
Arf4Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (180 aa)
GAKCyclin G associated kinase. (1310 aa)
CLTCL1Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1676 aa)
HM13Histocompatibility minor 13. (394 aa)
PIKFYVEPhosphoinositide kinase, FYVE-type zinc finger containing. (2079 aa)
DIAPH1Diaphanous related formin 1. (1213 aa)
SAR1ASecretion associated Ras related GTPase 1A; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
CLDN1Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (211 aa)
AP2M1AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (435 aa)
VAMP1Vesicle associated membrane protein 1. (118 aa)
EZREzrin. (586 aa)
RDXRadixin. (604 aa)
CYTH3Cytohesin 3. (399 aa)
SSR3Signal sequence receptor subunit 3. (185 aa)
SAR1BSecretion associated Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
RAB11AUncharacterized protein. (216 aa)
SRCTyrosine-protein kinase. (542 aa)
SSR2Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. (183 aa)
ARPC1BActin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (372 aa)
Rab13Uncharacterized protein. (203 aa)
GGA1Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (638 aa)
HGSHepatocyte growth factor-regulated tyrosine kinase substrate; Involved in intracellular signal transduction mediated by cytokines and growth factors. When associated with STAM, it suppresses DNA signaling upon stimulation by IL-2 and GM-CSF. Could be a direct effector of PI3-kinase in vesicular pathway via early endosomes and may regulate trafficking to early and late endosomes by recruiting clathrin. May concentrate ubiquitinated receptors within clathrin- coated regions. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with STAM (E [...] (778 aa)
SOCS1Suppressor of cytokine signaling 1. (217 aa)
EPN3Epsin 3. (635 aa)
LAMP1Lysosomal associated membrane protein 1. (410 aa)
RPL31Ribosomal protein L31. (128 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (322 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (446 aa)
STT3BSTT3 oligosaccharyltransferase complex catalytic subunit B. (828 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
ROCK2Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1371 aa)
ROCK1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1368 aa)
CD81Tetraspanin. (236 aa)
ULK2Unc-51 like autophagy activating kinase 2. (1033 aa)
STAMSignal transducing adaptor molecule. (537 aa)
Epn1ENTH domain-containing protein. (54 aa)
Dab2PID domain-containing protein. (766 aa)
ARF6ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
AXLAXL receptor tyrosine kinase. (888 aa)
APOEApolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] (298 aa)
HIP1RHuntingtin interacting protein 1 related. (1035 aa)
NPC1NPC intracellular cholesterol transporter 1. (1277 aa)
OSBPOxysterol binding protein. (767 aa)
ERBB2Receptor protein-tyrosine kinase. (1256 aa)
TBC1D20TBC1 domain family member 20. (403 aa)
DGAT1O-acyltransferase. (493 aa)
PRKD1Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. (845 aa)
RAB8BRAB8B, member RAS oncogene family. (201 aa)
VTA1Vesicle trafficking 1. (307 aa)
WIPI2WD repeat domain, phosphoinositide interacting 2. (443 aa)
SNAP29Synaptosome associated protein 29. (255 aa)
RAB6ARAB6A, member RAS oncogene family. (192 aa)
SEC63SEC63 homolog, protein translocation regulator. (742 aa)
GGA3Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (714 aa)
LIMK1LIM domain kinase 1. (646 aa)
NEDD4E3 ubiquitin-protein ligase. (896 aa)
RAB11FIP2RAB11 family interacting protein 2. (523 aa)
EGFRReceptor protein-tyrosine kinase. (1214 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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