32 items (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPTBN1	Spectrin beta chain; Belongs to the spectrin family. (2364 aa)
	AKAP6	A-kinase anchoring protein 6. (2208 aa)
	DSP	Desmoplakin. (2805 aa)
	DMD	Dystrophin. (3613 aa)
	SPTBN4	Spectrin beta chain; Belongs to the spectrin family. (2530 aa)
	SPTAN1	Spectrin alpha, non-erythrocytic 1. (2418 aa)
	MACF1	Microtubule actin crosslinking factor 1. (7286 aa)
	EVPL	Envoplakin. (1997 aa)
	KALRN	Kalirin RhoGEF kinase. (2964 aa)
	SPTBN2	Spectrin beta chain; Belongs to the spectrin family. (2386 aa)
	ACTN2	Actinin alpha 2. (894 aa)
	Sestd1	CRAL-TRIO domain-containing protein. (696 aa)
	SPTB	Spectrin beta chain; Belongs to the spectrin family. (2358 aa)
	MCF2L	MCF.2 cell line derived transforming sequence like. (1164 aa)
	SPTA1	Spectrin alpha, erythrocytic 1. (2415 aa)
	TRIO	Trio Rho guanine nucleotide exchange factor. (3062 aa)
	PLEC	Plectin. (4689 aa)
	ACTN4	Actinin alpha 4. (911 aa)
	SYNE2	Spectrin repeat containing nuclear envelope protein 2. (6922 aa)
	ENSCPOP00000026932	Uncharacterized protein. (474 aa)
	Syne1	KASH domain-containing protein. (952 aa)
	DRP2	Dystrophin related protein 2. (957 aa)
	UTRN	Utrophin. (3432 aa)
	CEP68	Centrosomal protein 68. (745 aa)
	ACTN3	Actinin alpha 3 (gene/pseudogene). (889 aa)
	MCF2	MCF.2 cell line derived transforming sequence. (1033 aa)
	Ccdc141	Ig-like domain-containing protein. (1370 aa)
	DST	Dystonin. (5380 aa)
	PPL	Periplakin. (1783 aa)
	ENSCPOP00000031692	CRAL-TRIO domain-containing protein. (645 aa)
	ENSCPOP00000029356	Uncharacterized protein. (1121 aa)
	ACTN1	Actinin alpha 1. (914 aa)

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTN1	ACTN2	ENSCPOP00000028282	ENSCPOP00000012587	Actinin alpha 1.	Actinin alpha 2.	0.540
ACTN1	ACTN3	ENSCPOP00000028282	ENSCPOP00000002746	Actinin alpha 1.	Actinin alpha 3 (gene/pseudogene).	0.440
ACTN1	ACTN4	ENSCPOP00000028282	ENSCPOP00000024646	Actinin alpha 1.	Actinin alpha 4.	0.991
ACTN1	Ccdc141	ENSCPOP00000028282	ENSCPOP00000003572	Actinin alpha 1.	Ig-like domain-containing protein.	0.643
ACTN1	DMD	ENSCPOP00000028282	ENSCPOP00000008169	Actinin alpha 1.	Dystrophin.	0.508
ACTN1	DRP2	ENSCPOP00000028282	ENSCPOP00000000477	Actinin alpha 1.	Dystrophin related protein 2.	0.508
ACTN1	ENSCPOP00000029356	ENSCPOP00000028282	ENSCPOP00000029356	Actinin alpha 1.	Uncharacterized protein.	0.790
ACTN1	UTRN	ENSCPOP00000028282	ENSCPOP00000000752	Actinin alpha 1.	Utrophin.	0.508
ACTN2	ACTN1	ENSCPOP00000012587	ENSCPOP00000028282	Actinin alpha 2.	Actinin alpha 1.	0.540
ACTN2	ACTN3	ENSCPOP00000012587	ENSCPOP00000002746	Actinin alpha 2.	Actinin alpha 3 (gene/pseudogene).	0.937
ACTN2	ACTN4	ENSCPOP00000012587	ENSCPOP00000024646	Actinin alpha 2.	Actinin alpha 4.	0.546
ACTN2	Ccdc141	ENSCPOP00000012587	ENSCPOP00000003572	Actinin alpha 2.	Ig-like domain-containing protein.	0.651
ACTN2	DMD	ENSCPOP00000012587	ENSCPOP00000008169	Actinin alpha 2.	Dystrophin.	0.582
ACTN2	DRP2	ENSCPOP00000012587	ENSCPOP00000000477	Actinin alpha 2.	Dystrophin related protein 2.	0.508
ACTN2	ENSCPOP00000029356	ENSCPOP00000012587	ENSCPOP00000029356	Actinin alpha 2.	Uncharacterized protein.	0.761
ACTN2	UTRN	ENSCPOP00000012587	ENSCPOP00000000752	Actinin alpha 2.	Utrophin.	0.526
ACTN3	ACTN1	ENSCPOP00000002746	ENSCPOP00000028282	Actinin alpha 3 (gene/pseudogene).	Actinin alpha 1.	0.440
ACTN3	ACTN2	ENSCPOP00000002746	ENSCPOP00000012587	Actinin alpha 3 (gene/pseudogene).	Actinin alpha 2.	0.937
ACTN3	ACTN4	ENSCPOP00000002746	ENSCPOP00000024646	Actinin alpha 3 (gene/pseudogene).	Actinin alpha 4.	0.441
ACTN3	Ccdc141	ENSCPOP00000002746	ENSCPOP00000003572	Actinin alpha 3 (gene/pseudogene).	Ig-like domain-containing protein.	0.651