STRINGSTRING
Rbm7 Rbm7 RNPS1 RNPS1 HNRNPD HNRNPD ALYREF ALYREF CELF4 CELF4 MSI2 MSI2 G3BP2 G3BP2 SNRPB2 SNRPB2 SSB SSB ENSCPOP00000027306 ENSCPOP00000027306 RAVER2 RAVER2 ENOX1 ENOX1 PPIE PPIE SYNCRIP SYNCRIP RBM18 RBM18 ZCRB1 ZCRB1 RBM15 RBM15 ENSCPOP00000028322 ENSCPOP00000028322 HNRNPA2B1 HNRNPA2B1 ENSCPOP00000028408 ENSCPOP00000028408 CELF1 CELF1 ENSCPOP00000028452 ENSCPOP00000028452 POLDIP3 POLDIP3 RBM47 RBM47 TIA1 TIA1 PABPN1 PABPN1 FUS FUS RBFOX3 RBFOX3 PABPC4L PABPC4L PPRC1 PPRC1 RBMX2 RBMX2 ENSCPOP00000029646 ENSCPOP00000029646 TARDBP TARDBP ENSCPOP00000029845 ENSCPOP00000029845 PTBP3 PTBP3 RBM15B RBM15B Matr3 Matr3 Eif4b Eif4b SRSF9 SRSF9 TRNAU1AP TRNAU1AP ENSCPOP00000030583 ENSCPOP00000030583 CPEB3 CPEB3 LOC100722482 LOC100722482 SCAF4 SCAF4 LOC100727992 LOC100727992 SF3B6 SF3B6 PSPC1 PSPC1 RBM39 RBM39 RBM19 RBM19 HNRNPR HNRNPR Celf6 Celf6 PABPC3 PABPC3 SRSF10 SRSF10 ENSCPOP00000031782 ENSCPOP00000031782 HNRNPM HNRNPM G3BP1 G3BP1 CNOT4 CNOT4 RBM17 RBM17 LOC100730358 LOC100730358 CPSF6 CPSF6 RBMS3 RBMS3 ESRP1 ESRP1 RNPC3 RNPC3 TRMT2A TRMT2A BOLL BOLL RBM24 RBM24 RRP7A RRP7A RBMS2 RBMS2 PTBP1 PTBP1 CELF3 CELF3 SRSF7 SRSF7 PPARGC1A PPARGC1A SPEN SPEN ELAVL2 ELAVL2 SRSF4 SRSF4 HNRNPA0 HNRNPA0 HNRNPAB HNRNPAB RBFOX2 RBFOX2 LOC100732533 LOC100732533 RBM44 RBM44 LOC100725600 LOC100725600 PABPN1L PABPN1L Cpeb1 Cpeb1 H0W658_CAVPO H0W658_CAVPO SAFB SAFB SLTM SLTM Scaf8 Scaf8 LOC100726016 LOC100726016 HNRNPH2 HNRNPH2 RBM26 RBM26 H0W1X5_CAVPO H0W1X5_CAVPO H0W1V8_CAVPO H0W1V8_CAVPO SNRNP70 SNRNP70 RBM8A RBM8A HNRNPF HNRNPF LOC101787900 LOC101787900 EIF4H EIF4H PABPC5 PABPC5 RBM20 RBM20 CSTF2 CSTF2 Hnrnpa1 Hnrnpa1 CIRBP CIRBP IGF2BP1 IGF2BP1 SETD1A SETD1A HNRNPDL HNRNPDL CPEB4 CPEB4 RBM34 RBM34 IGF2BP3 IGF2BP3 Sfpq Sfpq H0VRG5_CAVPO H0VRG5_CAVPO PUF60 PUF60 Tut1 Tut1 PABPC1L PABPC1L RBM4 RBM4 RBM38 RBM38 CELF2 CELF2 EIF3B EIF3B RBM42 RBM42 MSI1 MSI1 RALYL RALYL RBMS1 RBMS1 RBMX RBMX ELAVL1 ELAVL1 LARP7 LARP7 SRSF6 SRSF6 Srsf1 Srsf1 GRSF1 GRSF1 U2SURP U2SURP SAFB2 SAFB2 H0VIV8_CAVPO H0VIV8_CAVPO SART3 SART3 SRSF12 SRSF12 TRA2A TRA2A MYEF2 MYEF2 Rbm46 Rbm46 Nono Nono LOC101788648 LOC101788648 CPSF7 CPSF7 A1CF A1CF SRSF11 SRSF11 LARP4B LARP4B EIF3G EIF3G DND1 DND1 REXO5 REXO5 SREK1 SREK1 MARF1 MARF1 SF3B4 SF3B4 RBM5 RBM5 RBM6 RBM6 RBM14 RBM14 RBM12B RBM12B RBPMS2 RBPMS2 HNRNPL HNRNPL DAZL DAZL HNRNPLL HNRNPLL NIFK NIFK HNRNPH3 HNRNPH3 TRA2B TRA2B RBM28 RBM28 Celf5 Celf5 IGF2BP2 IGF2BP2 RBM11 RBM11 U2af1 U2af1 UHMK1 UHMK1 Hnrnpa3 Hnrnpa3 ZRSR2 ZRSR2 CSTF2T CSTF2T PTBP2 PTBP2 RBM3 RBM3 ESRP2 ESRP2 NCBP2 NCBP2 RBM10 RBM10 SNRNP35 SNRNP35 Rbm27 Rbm27 RBM25 RBM25 PPARGC1B PPARGC1B RBM22 RBM22 ELAVL3 ELAVL3 U2AF2 U2AF2 Slirp Slirp Rdm1 Rdm1 Hnrnpc Hnrnpc CPEB2 CPEB2 ENOX2 ENOX2 NCL NCL Raver1 Raver1 RBM45 RBM45 TNRC6C TNRC6C RALY RALY PPIL4 PPIL4 RBFOX1 RBFOX1 Elavl4 Elavl4 EWSR1 EWSR1 RBM12 RBM12 PABPC4 PABPC4 ENSCPOP00000025183 ENSCPOP00000025183 DAZAP1 DAZAP1 SRSF3 SRSF3 SRSF5 SRSF5 RBM4B RBM4B RBM33 RBM33 SNRPA SNRPA ACIN1 ACIN1 Hnrnph1 Hnrnph1 RBPMS RBPMS TNRC6A TNRC6A RBM41 RBM41 LOC100730445 LOC100730445 NELFE NELFE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rbm7RRM domain-containing protein. (241 aa)
RNPS1RNA binding protein with serine rich domain 1. (305 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (313 aa)
ALYREFAly/REF export factor. (256 aa)
CELF4CUGBP Elav-like family member 4. (480 aa)
MSI2Musashi RNA binding protein 2. (283 aa)
G3BP2G3BP stress granule assembly factor 2. (482 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (224 aa)
SSBSmall RNA binding exonuclease protection factor La. (405 aa)
ENSCPOP00000027306RRM domain-containing protein. (185 aa)
RAVER2Ribonucleoprotein, PTB binding 2. (690 aa)
ENOX1Ecto-NOX disulfide-thiol exchanger 1. (643 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
SYNCRIPSynaptotagmin binding cytoplasmic RNA interacting protein. (562 aa)
RBM18RNA binding motif protein 18. (190 aa)
ZCRB1Zinc finger CCHC-type and RNA binding motif containing 1. (215 aa)
RBM15RNA binding motif protein 15. (961 aa)
ENSCPOP00000028322RRM domain-containing protein. (576 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (369 aa)
ENSCPOP00000028408RRM domain-containing protein. (385 aa)
CELF1CUGBP Elav-like family member 1. (487 aa)
ENSCPOP00000028452Uncharacterized protein. (161 aa)
POLDIP3DNA polymerase delta interacting protein 3. (417 aa)
RBM47RNA binding motif protein 47. (592 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (398 aa)
PABPN1Poly(A) binding protein nuclear 1. (306 aa)
FUSFUS RNA binding protein. (490 aa)
RBFOX3RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. (376 aa)
PABPC4LPoly(A) binding protein cytoplasmic 4 like. (359 aa)
PPRC1PPARG related coactivator 1. (1661 aa)
RBMX2RNA binding motif protein X-linked 2. (333 aa)
ENSCPOP00000029646RRM domain-containing protein. (236 aa)
TARDBPTAR DNA binding protein. (413 aa)
ENSCPOP00000029845Uncharacterized protein. (364 aa)
PTBP3Polypyrimidine tract binding protein 3. (551 aa)
RBM15BRNA binding motif protein 15B. (891 aa)
Matr3Uncharacterized protein. (847 aa)
Eif4bRRM domain-containing protein. (611 aa)
SRSF9Serine and arginine rich splicing factor 9. (221 aa)
TRNAU1APtRNA selenocysteine 1 associated protein 1. (287 aa)
ENSCPOP00000030583RRM domain-containing protein. (94 aa)
CPEB3Cytoplasmic polyadenylation element binding protein 3. (588 aa)
LOC100722482Uncharacterized protein. (462 aa)
SCAF4SR-related CTD associated factor 4. (1136 aa)
LOC100727992Uncharacterized protein. (391 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
PSPC1Paraspeckle component 1. (520 aa)
RBM39Uncharacterized protein. (490 aa)
RBM19RNA binding motif protein 19. (961 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (633 aa)
Celf6Uncharacterized protein. (392 aa)
PABPC3Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (586 aa)
SRSF10Serine and arginine rich splicing factor 10. (262 aa)
ENSCPOP00000031782Uncharacterized protein. (133 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (730 aa)
G3BP1G3BP stress granule assembly factor 1. (465 aa)
CNOT4CCR4-NOT transcription complex subunit 4. (710 aa)
RBM17RNA binding motif protein 17. (403 aa)
LOC100730358Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (792 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (588 aa)
RBMS3RNA binding motif single stranded interacting protein 3. (464 aa)
ESRP1Epithelial splicing regulatory protein 1. (681 aa)
RNPC3RNA binding region (RNP1, RRM) containing 3. (517 aa)
TRMT2AtRNA methyltransferase 2 homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (619 aa)
BOLLBoule homolog, RNA binding protein. (322 aa)
RBM24RNA binding motif protein 24. (236 aa)
RRP7ARibosomal RNA processing 7 homolog A. (280 aa)
RBMS2RNA binding motif single stranded interacting protein 2. (407 aa)
PTBP1Polypyrimidine tract binding protein 1. (557 aa)
CELF3CUGBP Elav-like family member 3. (479 aa)
SRSF7Serine and arginine rich splicing factor 7. (238 aa)
PPARGC1APPARG coactivator 1 alpha. (796 aa)
SPENSpen family transcriptional repressor. (3456 aa)
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (389 aa)
SRSF4Serine and arginine rich splicing factor 4. (497 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (301 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (327 aa)
RBFOX2RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. (396 aa)
LOC100732533Uncharacterized protein. (311 aa)
RBM44RNA binding motif protein 44. (999 aa)
LOC100725600Uncharacterized protein. (536 aa)
PABPN1LPoly(A) binding protein nuclear 1 like, cytoplasmic. (273 aa)
Cpeb1RRM domain-containing protein. (560 aa)
H0W658_CAVPOUncharacterized protein. (409 aa)
SAFBScaffold attachment factor B. (938 aa)
SLTMSAFB like transcription modulator. (921 aa)
Scaf8Uncharacterized protein. (1187 aa)
LOC100726016Uncharacterized protein. (200 aa)
HNRNPH2Heterogeneous nuclear ribonucleoprotein H2. (449 aa)
RBM26RNA binding motif protein 26. (893 aa)
H0W1X5_CAVPOUncharacterized protein. (477 aa)
H0W1V8_CAVPOUncharacterized protein. (319 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (440 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (171 aa)
HNRNPFHeterogeneous nuclear ribonucleoprotein F. (415 aa)
LOC101787900Uncharacterized protein. (501 aa)
EIF4HEukaryotic translation initiation factor 4H. (247 aa)
PABPC5Poly(A) binding protein cytoplasmic 5. (382 aa)
RBM20RNA binding motif protein 20. (748 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
Hnrnpa1RRM domain-containing protein. (324 aa)
CIRBPCold inducible RNA binding protein. (173 aa)
IGF2BP1Insulin like growth factor 2 mRNA binding protein 1. (547 aa)
SETD1ASET domain containing 1A, histone lysine methyltransferase. (1702 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D like. (403 aa)
CPEB4Cytoplasmic polyadenylation element binding protein 4. (636 aa)
RBM34RNA binding motif protein 34. (430 aa)
IGF2BP3Insulin like growth factor 2 mRNA binding protein 3. (519 aa)
SfpqRRM domain-containing protein. (343 aa)
H0VRG5_CAVPOUncharacterized protein. (425 aa)
PUF60Poly(U) binding splicing factor 60. (560 aa)
Tut1RRM domain-containing protein. (852 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (618 aa)
RBM4RNA binding motif protein 4. (365 aa)
RBM38RNA binding motif protein 38. (247 aa)
CELF2CUGBP Elav-like family member 2. (526 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (791 aa)
RBM42RNA binding motif protein 42. (481 aa)
MSI1Musashi RNA binding protein 1. (361 aa)
RALYLRALY RNA binding protein like. (292 aa)
RBMS1RNA binding motif single stranded interacting protein 1. (404 aa)
RBMXRRM domain-containing protein. (391 aa)
ELAVL1ELAV like RNA binding protein 1. (295 aa)
LARP7La ribonucleoprotein domain family member 7. (567 aa)
SRSF6Serine and arginine rich splicing factor 6. (318 aa)
Srsf1Uncharacterized protein. (253 aa)
GRSF1G-rich RNA sequence binding factor 1. (471 aa)
U2SURPU2 snRNP associated SURP domain containing. (923 aa)
SAFB2Scaffold attachment factor B2. (950 aa)
H0VIV8_CAVPOUncharacterized protein. (372 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (961 aa)
SRSF12Serine and arginine rich splicing factor 12. (239 aa)
TRA2ATransformer 2 alpha homolog. (282 aa)
MYEF2Myelin expression factor 2. (574 aa)
Rbm46Uncharacterized protein. (534 aa)
NonoUncharacterized protein. (482 aa)
LOC101788648Uncharacterized protein. (485 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (471 aa)
A1CFAPOBEC1 complementation factor. (594 aa)
SRSF11Serine and arginine rich splicing factor 11. (478 aa)
LARP4BLa ribonucleoprotein domain family member 4B. (738 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (320 aa)
DND1DND microRNA-mediated repression inhibitor 1. (353 aa)
REXO5RNA exonuclease 5. (814 aa)
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (548 aa)
MARF1Meiosis regulator and mRNA stability factor 1. (1738 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
RBM5RNA binding motif protein 5. (814 aa)
RBM6RNA binding motif protein 6. (1105 aa)
RBM14RNA binding motif protein 14. (669 aa)
RBM12BRNA binding motif protein 12B. (952 aa)
RBPMS2RNA binding protein, mRNA processing factor 2. (178 aa)
HNRNPLHeterogeneous nuclear ribonucleoprotein L. (586 aa)
DAZLDeleted in azoospermia like. (295 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L like. (580 aa)
NIFKNucleolar protein interacting with the FHA domain of MKI67. (295 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (346 aa)
TRA2BTransformer 2 beta homolog. (268 aa)
RBM28RNA binding motif protein 28. (758 aa)
Celf5RRM domain-containing protein. (322 aa)
IGF2BP2Insulin like growth factor 2 mRNA binding protein 2. (539 aa)
RBM11RNA binding motif protein 11. (221 aa)
U2af1Uncharacterized protein. (239 aa)
UHMK1U2AF homology motif kinase 1. (419 aa)
Hnrnpa3Uncharacterized protein. (368 aa)
ZRSR2Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (438 aa)
CSTF2TCleavage stimulation factor subunit 2 tau variant. (623 aa)
PTBP2Polypyrimidine tract binding protein 2. (531 aa)
RBM3RNA binding motif protein 3. (159 aa)
ESRP2Epithelial splicing regulatory protein 2. (719 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
RBM10RNA binding motif protein 10. (931 aa)
SNRNP35Small nuclear ribonucleoprotein U11/U12 subunit 35. (246 aa)
Rbm27Uncharacterized protein. (908 aa)
RBM25RNA binding motif protein 25. (843 aa)
PPARGC1BPPARG coactivator 1 beta. (1028 aa)
RBM22RNA binding motif protein 22. (420 aa)
ELAVL3ELAV-like protein; Belongs to the RRM elav family. (308 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
SlirpRRM domain-containing protein. (111 aa)
Rdm1RRM domain-containing protein. (287 aa)
HnrnpcRRM domain-containing protein. (307 aa)
CPEB2Cytoplasmic polyadenylation element binding protein 2. (564 aa)
ENOX2Ecto-NOX disulfide-thiol exchanger 2. (549 aa)
NCLNucleolin. (713 aa)
Raver1Uncharacterized protein. (740 aa)
RBM45RNA binding motif protein 45. (480 aa)
TNRC6CTrinucleotide repeat containing adaptor 6C. (1892 aa)
RALYRALY heterogeneous nuclear ribonucleoprotein. (314 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (489 aa)
RBFOX1RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (418 aa)
Elavl4ELAV-like protein; Belongs to the RRM elav family. (385 aa)
EWSR1EWS RNA binding protein 1. (653 aa)
RBM12RNA binding motif protein 12. (998 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
ENSCPOP00000025183Uncharacterized protein. (1172 aa)
DAZAP1DAZ associated protein 1. (400 aa)
SRSF3Serine and arginine rich splicing factor 3. (164 aa)
SRSF5Serine and arginine rich splicing factor 5. (274 aa)
RBM4BRNA binding motif protein 4B. (358 aa)
RBM33RNA binding motif protein 33. (1225 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (282 aa)
ACIN1Apoptotic chromatin condensation inducer 1. (1327 aa)
Hnrnph1Uncharacterized protein. (472 aa)
RBPMSRNA binding protein, mRNA processing factor. (219 aa)
TNRC6ATrinucleotide repeat containing adaptor 6A. (1897 aa)
RBM41RNA binding motif protein 41. (437 aa)
LOC100730445Uncharacterized protein. (399 aa)
NELFENegative elongation factor complex member E. (382 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (22%) [HD]