STRINGSTRING
FSD1 FSD1 TRIM23 TRIM23 MID1 MID1 MID2 MID2 TRIM67 TRIM67 TRIM24 TRIM24 TRIM9 TRIM9 TRIM33 TRIM33 TRIM66 TRIM66 TRIM2 TRIM2 TRIM37 TRIM37 Trim28 Trim28 H0V4A5_CAVPO H0V4A5_CAVPO TRIM3 TRIM3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FSD1Fibronectin type III and SPRY domain containing 1. (496 aa)
TRIM23Tripartite motif containing 23. (574 aa)
MID1Midline 1. (667 aa)
MID2Midline 2. (685 aa)
TRIM67Tripartite motif containing 67. (753 aa)
TRIM24Tripartite motif containing 24. (1002 aa)
TRIM9Tripartite motif containing 9. (786 aa)
TRIM33Tripartite motif containing 33. (1128 aa)
TRIM66Tripartite motif containing 66. (1319 aa)
TRIM2Tripartite motif containing 2. (744 aa)
TRIM37Tripartite motif containing 37. (926 aa)
Trim28Uncharacterized protein. (829 aa)
H0V4A5_CAVPOUncharacterized protein. (830 aa)
TRIM3Tripartite motif containing 3. (744 aa)
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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