(17 nodes) Ribosome network (Heterocephalus glaber)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rpl35a	60S ribosomal protein L35a. (101 aa)
	Rpl14	60S ribosomal protein L14. (211 aa)
	RPS8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
	RPS19	40S ribosomal protein S19. (145 aa)
	RPS20	40S ribosomal protein S20 isoform 1. (119 aa)
	Rpl18a	60S ribosomal protein L18a. (150 aa)
	Rps5	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (204 aa)
	Rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	Rpl11	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
	RPL23	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	Rpl19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	RPL28	60S ribosomal protein L28 isoform 1. (137 aa)
	Rps29	40S ribosomal protein S29. (66 aa)
	RPL24	60S ribosomal protein L24. (157 aa)
	Cd74	HLA class II histocompatibility antigen gamma chain. (329 aa)
	RPS7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
	Rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)

Your Current Organism:

Heterocephalus glaber

NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cd74	RPL23	G5C391	G5BK67	HLA class II histocompatibility antigen gamma chain.	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999
Cd74	RPL24	G5C391	G5C020	HLA class II histocompatibility antigen gamma chain.	60S ribosomal protein L24.	0.999
Cd74	RPL28	G5C391	G5BVZ2	HLA class II histocompatibility antigen gamma chain.	60S ribosomal protein L28 isoform 1.	0.999
Cd74	RPS19	G5C391	G5AZQ1	HLA class II histocompatibility antigen gamma chain.	40S ribosomal protein S19.	0.999
Cd74	RPS20	G5C391	G5B335	HLA class II histocompatibility antigen gamma chain.	40S ribosomal protein S20 isoform 1.	0.999
Cd74	RPS7	G5C391	G5C7L2	HLA class II histocompatibility antigen gamma chain.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
Cd74	RPS8	G5C391	G5ARV4	HLA class II histocompatibility antigen gamma chain.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
Cd74	Rpl11	G5C391	G5BHY5	HLA class II histocompatibility antigen gamma chain.	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.999
Cd74	Rpl14	G5C391	G5ALX1	HLA class II histocompatibility antigen gamma chain.	60S ribosomal protein L14.	0.999
Cd74	Rpl18a	G5C391	G5B4E2	HLA class II histocompatibility antigen gamma chain.	60S ribosomal protein L18a.	0.998
Cd74	Rpl19	G5C391	G5BRW3	HLA class II histocompatibility antigen gamma chain.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
Cd74	Rpl35a	G5C391	G5ALA5	HLA class II histocompatibility antigen gamma chain.	60S ribosomal protein L35a.	0.999
Cd74	Rpl37	G5C391	G5B842	HLA class II histocompatibility antigen gamma chain.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
Cd74	Rps21	G5C391	G5C8F1	HLA class II histocompatibility antigen gamma chain.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999
Cd74	Rps29	G5C391	G5BW63	HLA class II histocompatibility antigen gamma chain.	40S ribosomal protein S29.	0.999
Cd74	Rps5	G5C391	G5B7K7	HLA class II histocompatibility antigen gamma chain.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.999
RPL23	Cd74	G5BK67	G5C391	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	HLA class II histocompatibility antigen gamma chain.	0.999
RPL23	RPL24	G5BK67	G5C020	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L24.	0.999
RPL23	RPL28	G5BK67	G5BVZ2	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L28 isoform 1.	0.999
RPL23	RPS19	G5BK67	G5AZQ1	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	40S ribosomal protein S19.	0.999