STRINGSTRING
GW7_14229 GW7_14229 Rnf2 Rnf2 GW7_11253 GW7_11253 GW7_04470 GW7_04470 Skp1 Skp1 GW7_13064 GW7_13064 Pcgf5 Pcgf5 GW7_15918 GW7_15918 GW7_07467 GW7_07467 GW7_19209 GW7_19209 GW7_21203 GW7_21203 PCGF3 PCGF3 GW7_20356 GW7_20356 GW7_07252 GW7_07252 GW7_21702 GW7_21702 Ddb1 Ddb1 Trim37 Trim37 PCGF1 PCGF1 GW7_03108 GW7_03108 Rybp Rybp GW7_02913 GW7_02913 GW7_01002 GW7_01002 GW7_10768 GW7_10768 GW7_00850 GW7_00850 RNF168 RNF168 GW7_06116 GW7_06116 GW7_07543 GW7_07543 GW7_15865 GW7_15865 Bmi1 Bmi1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GW7_14229Lysine-specific demethylase 2B. (436 aa)
Rnf2E3 ubiquitin-protein ligase RING2. (336 aa)
GW7_11253DNA damage-binding protein 2. (365 aa)
GW7_04470S-phase kinase-associated protein 1. (94 aa)
Skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
GW7_13064Polycomb group RING finger protein 2. (452 aa)
Pcgf5Polycomb group RING finger protein 5. (255 aa)
GW7_15918Polycomb group RING finger protein 6. (248 aa)
GW7_07467Lysine-specific demethylase 2B. (353 aa)
GW7_19209S-phase kinase-associated protein 1. (170 aa)
GW7_21203S-phase kinase-associated protein 1; Belongs to the SKP1 family. (108 aa)
PCGF3Polycomb group RING finger protein 3. (241 aa)
GW7_20356E3 ubiquitin-protein ligase RING1. (376 aa)
GW7_07252S-phase kinase-associated protein 1. (123 aa)
GW7_21702E3 ubiquitin-protein ligase TRIM37. (491 aa)
Ddb1DNA damage-binding protein 1. (1144 aa)
Trim37E3 ubiquitin-protein ligase TRIM37. (944 aa)
PCGF1Polycomb group RING finger protein 1. (259 aa)
GW7_03108Lysine-specific demethylase 2B. (1314 aa)
RybpRING1 and YY1-binding protein. (180 aa)
GW7_02913S-phase kinase-associated protein 1; Belongs to the SKP1 family. (123 aa)
GW7_01002S-phase kinase-associated protein 1. (78 aa)
GW7_10768RING1 and YY1-binding protein. (305 aa)
GW7_00850S-phase kinase-associated protein 1. (141 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (558 aa)
GW7_06116Uncharacterized protein. (84 aa)
GW7_07543Cullin-4B; Belongs to the cullin family. (352 aa)
GW7_15865E3 ubiquitin-protein ligase RING2. (169 aa)
Bmi1Polycomb complex protein BMI-1. (326 aa)
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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