30 items (Heterocephalus glaber) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Gtf2a2	Transcription initiation factor IIA subunit 2. (102 aa)
	GW7_03614	Transcription initiation factor IIB. (131 aa)
	Taf6	Transcription initiation factor TFIID subunit 6. (677 aa)
	MED18	Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (208 aa)
	TAF12	Transcription initiation factor TFIID subunit 12. (161 aa)
	GW7_10104	Transcription initiation factor TFIID subunit 6. (381 aa)
	MED8	Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (276 aa)
	TAF7	Transcription initiation factor TFIID subunit 7. (349 aa)
	Med30	Mediator of RNA polymerase II transcription subunit 30. (178 aa)
	Taf3	Transcription initiation factor TFIID subunit 3. (791 aa)
	Taf6l	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L. (365 aa)
	GW7_02599	Transcription initiation factor TFIID subunit 12. (160 aa)
	GW7_18829	Transcription initiation factor TFIID subunit 13. (85 aa)
	Dr1	Protein Dr1. (144 aa)
	GW7_17439	Protein Dr1. (131 aa)
	Taf10	Transcription initiation factor TFIID subunit 10. (127 aa)
	Taf11	Transcription initiation factor TFIID subunit 11. (211 aa)
	GW7_16332	Transcription initiation factor TFIID subunit 4. (632 aa)
	Gtf2b	Transcription initiation factor IIB. (309 aa)
	GW7_12914	Transcription initiation factor IIB. (234 aa)
	GW7_12915	Transcription initiation factor IIB. (185 aa)
	GW7_18326	Transcription initiation factor TFIID subunit 12. (129 aa)
	Taf8	Transcription initiation factor TFIID subunit 8. (310 aa)
	Taf13	Transcription initiation factor TFIID subunit 13. (86 aa)
	GW7_18225	Transcription initiation factor TFIID subunit 13. (84 aa)
	GW7_14135	Transcription initiation factor TFIID subunit 7-like protein. (369 aa)
	GW7_05767	Protein Dr1. (114 aa)
	Gtf2f2	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (271 aa)
	Taf2	Transcription initiation factor TFIID subunit 2. (1172 aa)
	GW7_15919	Transcription initiation factor TFIID subunit 5. (309 aa)

Your Current Organism:

Heterocephalus glaber

NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GW7_02599	GW7_03614	G5AYV2	G5AL41	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor IIB.	0.661
GW7_02599	GW7_10104	G5AYV2	G5APL7	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 6.	0.896
GW7_02599	GW7_12914	G5AYV2	G5BMR0	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor IIB.	0.661
GW7_02599	GW7_12915	G5AYV2	G5BMR1	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor IIB.	0.661
GW7_02599	GW7_14135	G5AYV2	G5C2S4	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 7-like protein.	0.893
GW7_02599	GW7_15919	G5AYV2	G5CAJ0	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 5.	0.923
GW7_02599	GW7_16332	G5AYV2	G5BDX4	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 4.	0.976
GW7_02599	GW7_18225	G5AYV2	G5BSX9	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 13.	0.811
GW7_02599	GW7_18829	G5AYV2	G5AZH6	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 13.	0.811
GW7_02599	Gtf2a2	G5AYV2	G5AWC6	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor IIA subunit 2.	0.817
GW7_02599	Gtf2b	G5AYV2	G5BGF9	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor IIB.	0.661
GW7_02599	Gtf2f2	G5AYV2	G5C909	Transcription initiation factor TFIID subunit 12.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.812
GW7_02599	MED18	G5AYV2	G5AP88	Transcription initiation factor TFIID subunit 12.	Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.447
GW7_02599	MED8	G5AYV2	G5AQF9	Transcription initiation factor TFIID subunit 12.	Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.592
GW7_02599	Med30	G5AYV2	G5AT88	Transcription initiation factor TFIID subunit 12.	Mediator of RNA polymerase II transcription subunit 30.	0.447
GW7_02599	TAF7	G5AYV2	G5AQQ1	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 7.	0.893
GW7_02599	Taf10	G5AYV2	G5BBQ4	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 10.	0.940
GW7_02599	Taf11	G5AYV2	G5BCF5	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 11.	0.959
GW7_02599	Taf13	G5AYV2	G5BQV3	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 13.	0.811
GW7_02599	Taf2	G5AYV2	G5C9R2	Transcription initiation factor TFIID subunit 12.	Transcription initiation factor TFIID subunit 2.	0.959