32 items (Heterocephalus glaber) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Ihh	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (410 aa)
	Ptn	Pleiotrophin. (226 aa)
	Cntf	Ciliary neurotrophic factor. (198 aa)
	Hcn1	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1. (532 aa)
	GW7_20956	Tyrosine-protein kinase receptor. (981 aa)
	Sox9	Transcription factor SOX-9. (507 aa)
	GW7_01770	Rod outer segment membrane protein 1. (261 aa)
	Naglu	Alpha-N-acetylglucosaminidase. (652 aa)
	Nrl	Neural retina-specific leucine zipper protein. (237 aa)
	Sdk2	Protein sidekick-2. (2137 aa)
	Rp1	Oxygen-regulated protein 1. (2064 aa)
	GW7_01150	Crumbs-like protein 2. (1031 aa)
	GW7_06243	Phosphodiesterase. (796 aa)
	Thrb	Thyroid hormone receptor beta. (476 aa)
	GW7_08509	X-linked retinitis pigmentosa GTPase regulator-interacting protein 1. (1236 aa)
	Dscam	Down syndrome cell adhesion molecule. (1845 aa)
	Prom1	Prominin-1. (854 aa)
	Thy1	Thy-1 membrane glycoprotein. (95 aa)
	GW7_11810	Tetratricopeptide repeat protein 8. (233 aa)
	Cnga3	Cyclic nucleotide-gated cation channel alpha-3. (639 aa)
	GW7_07061	Sodium bicarbonate cotransporter 3. (1132 aa)
	Ttc8	Tetratricopeptide repeat protein 8. (312 aa)
	Bbs4	Bardet-Biedl syndrome 4 protein. (553 aa)
	Cabp4	Calcium-binding protein 4. (271 aa)
	GW7_06034	Protein fantom. (1408 aa)
	Sox8	Transcription factor SOX-8. (362 aa)
	Ahi1	Jouberin. (1260 aa)
	GW7_10438	Jouberin. (150 aa)
	Casz1	Zinc finger protein castor-like protein 1. (1644 aa)
	GW7_18853	Nuclear receptor ROR-beta. (510 aa)
	Bhlhe23	Class E basic helix-loop-helix protein 23. (98 aa)
	GW7_03293	Alstrom syndrome protein 1. (3836 aa)

Your Current Organism:

Heterocephalus glaber

NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ahi1	GW7_06034	G5C1A3	G5BSE2	Jouberin.	Protein fantom.	0.506
Bbs4	GW7_06034	G5BRE7	G5BSE2	Bardet-Biedl syndrome 4 protein.	Protein fantom.	0.474
Bbs4	GW7_11810	G5BRE7	G5BIJ9	Bardet-Biedl syndrome 4 protein.	Tetratricopeptide repeat protein 8.	0.958
Bbs4	Ttc8	G5BRE7	G5BRE0	Bardet-Biedl syndrome 4 protein.	Tetratricopeptide repeat protein 8.	0.958
Cabp4	GW7_01770	G5BSA3	G5AYH6	Calcium-binding protein 4.	Rod outer segment membrane protein 1.	0.492
Cabp4	GW7_08509	G5BSA3	G5BFV4	Calcium-binding protein 4.	X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	0.416
Cnga3	GW7_06243	G5BMT8	G5BE84	Cyclic nucleotide-gated cation channel alpha-3.	Phosphodiesterase.	0.705
GW7_01770	Cabp4	G5AYH6	G5BSA3	Rod outer segment membrane protein 1.	Calcium-binding protein 4.	0.492
GW7_01770	GW7_06243	G5AYH6	G5BE84	Rod outer segment membrane protein 1.	Phosphodiesterase.	0.568
GW7_06034	Ahi1	G5BSE2	G5C1A3	Protein fantom.	Jouberin.	0.506
GW7_06034	Bbs4	G5BSE2	G5BRE7	Protein fantom.	Bardet-Biedl syndrome 4 protein.	0.474
GW7_06034	GW7_10438	G5BSE2	G5C3Q2	Protein fantom.	Jouberin.	0.506
GW7_06243	Cnga3	G5BE84	G5BMT8	Phosphodiesterase.	Cyclic nucleotide-gated cation channel alpha-3.	0.705
GW7_06243	GW7_01770	G5BE84	G5AYH6	Phosphodiesterase.	Rod outer segment membrane protein 1.	0.568
GW7_08509	Cabp4	G5BFV4	G5BSA3	X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	Calcium-binding protein 4.	0.416
GW7_10438	GW7_06034	G5C3Q2	G5BSE2	Jouberin.	Protein fantom.	0.506
GW7_11810	Bbs4	G5BIJ9	G5BRE7	Tetratricopeptide repeat protein 8.	Bardet-Biedl syndrome 4 protein.	0.958
GW7_11810	Ttc8	G5BIJ9	G5BRE0	Tetratricopeptide repeat protein 8.	Tetratricopeptide repeat protein 8.	0.892
Ihh	Sox8	G5AKL0	G5BXU3	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Transcription factor SOX-8.	0.417
Ihh	Sox9	G5AKL0	G5AV36	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Transcription factor SOX-9.	0.498