(7 nodes) Mixed, incl. Mitotic spindle midzone, and SAPAP family network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3RKD8_TRIAD	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (396 aa)
	B3RP79_TRIAD	Uncharacterized protein. (2749 aa)
	B3RYC0_TRIAD	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (328 aa)
	B3S250_TRIAD	Uncharacterized protein. (834 aa)
	B3S3D6_TRIAD	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (548 aa)
	B3S420_TRIAD	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (293 aa)
	B3S7D2_TRIAD	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (339 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RKD8_TRIAD	B3RP79_TRIAD	B3RKD8	B3RP79	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.695
B3RKD8_TRIAD	B3RYC0_TRIAD	B3RKD8	B3RYC0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.915
B3RKD8_TRIAD	B3S250_TRIAD	B3RKD8	B3S250	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.866
B3RKD8_TRIAD	B3S3D6_TRIAD	B3RKD8	B3S3D6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.856
B3RKD8_TRIAD	B3S420_TRIAD	B3RKD8	B3S420	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.957
B3RKD8_TRIAD	B3S7D2_TRIAD	B3RKD8	B3S7D2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.898
B3RP79_TRIAD	B3RKD8_TRIAD	B3RP79	B3RKD8	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.695
B3RP79_TRIAD	B3RYC0_TRIAD	B3RP79	B3RYC0	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.946
B3RP79_TRIAD	B3S250_TRIAD	B3RP79	B3S250	Uncharacterized protein.	Uncharacterized protein.	0.981
B3RP79_TRIAD	B3S3D6_TRIAD	B3RP79	B3S3D6	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.904
B3RP79_TRIAD	B3S420_TRIAD	B3RP79	B3S420	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.969
B3RP79_TRIAD	B3S7D2_TRIAD	B3RP79	B3S7D2	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.967
B3RYC0_TRIAD	B3RKD8_TRIAD	B3RYC0	B3RKD8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.915
B3RYC0_TRIAD	B3RP79_TRIAD	B3RYC0	B3RP79	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.946
B3RYC0_TRIAD	B3S250_TRIAD	B3RYC0	B3S250	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.967
B3RYC0_TRIAD	B3S3D6_TRIAD	B3RYC0	B3S3D6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.885
B3RYC0_TRIAD	B3S420_TRIAD	B3RYC0	B3S420	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.942
B3RYC0_TRIAD	B3S7D2_TRIAD	B3RYC0	B3S7D2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.929
B3S250_TRIAD	B3RKD8_TRIAD	B3S250	B3RKD8	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.866
B3S250_TRIAD	B3RP79_TRIAD	B3S250	B3RP79	Uncharacterized protein.	Uncharacterized protein.	0.981