(21 nodes) Regulation of double-strand break repair via homologous recombination network (Trichoplax adhaerens)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3RPR1_TRIAD	Uncharacterized protein. (1207 aa)
	B3RR69_TRIAD	FAM35_C domain-containing protein. (601 aa)
	B3RSK0_TRIAD	Predicted protein. (1507 aa)
	B3RT31_TRIAD	Uncharacterized protein. (1137 aa)
	B3RTH9_TRIAD	YL1_C domain-containing protein. (445 aa)
	B3RVZ5_TRIAD	Uncharacterized protein. (896 aa)
	B3RX95_TRIAD	Uncharacterized protein. (582 aa)
	B3RXL1_TRIAD	Uncharacterized protein. (388 aa)
	B3S0A5_TRIAD	Uncharacterized protein. (240 aa)
	B3S1S2_TRIAD	Uncharacterized protein. (713 aa)
	B3S2Q7_TRIAD	Helicase ATP-binding domain-containing protein. (702 aa)
	B3S344_TRIAD	Predicted protein. (830 aa)
	B3S351_TRIAD	Uncharacterized protein. (958 aa)
	B3S4V5_TRIAD	Uncharacterized protein. (123 aa)
	B3S6C0_TRIAD	Helicase ATP-binding domain-containing protein. (995 aa)
	B3S721_TRIAD	Predicted protein. (856 aa)
	B3S7P8_TRIAD	WD_REPEATS_REGION domain-containing protein. (422 aa)
	B3S8K1_TRIAD	Enhancer of polycomb-like protein. (196 aa)
	B3S8K2_TRIAD	Uncharacterized protein. (54 aa)
	B3S9Y7_TRIAD	Uncharacterized protein. (151 aa)
	B3SE35_TRIAD	Uncharacterized protein. (130 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RR69_TRIAD	B3RSK0_TRIAD	B3RR69	B3RSK0	FAM35_C domain-containing protein.	Predicted protein.	0.414
B3RR69_TRIAD	B3S0A5_TRIAD	B3RR69	B3S0A5	FAM35_C domain-containing protein.	Uncharacterized protein.	0.918
B3RSK0_TRIAD	B3RR69_TRIAD	B3RSK0	B3RR69	Predicted protein.	FAM35_C domain-containing protein.	0.414
B3RSK0_TRIAD	B3RXL1_TRIAD	B3RSK0	B3RXL1	Predicted protein.	Uncharacterized protein.	0.705
B3RTH9_TRIAD	B3S344_TRIAD	B3RTH9	B3S344	YL1_C domain-containing protein.	Predicted protein.	0.763
B3RTH9_TRIAD	B3S4V5_TRIAD	B3RTH9	B3S4V5	YL1_C domain-containing protein.	Uncharacterized protein.	0.935
B3RTH9_TRIAD	B3S8K1_TRIAD	B3RTH9	B3S8K1	YL1_C domain-containing protein.	Enhancer of polycomb-like protein.	0.460
B3RTH9_TRIAD	B3S8K2_TRIAD	B3RTH9	B3S8K2	YL1_C domain-containing protein.	Uncharacterized protein.	0.460
B3RX95_TRIAD	B3RXL1_TRIAD	B3RX95	B3RXL1	Uncharacterized protein.	Uncharacterized protein.	0.416
B3RXL1_TRIAD	B3RSK0_TRIAD	B3RXL1	B3RSK0	Uncharacterized protein.	Predicted protein.	0.705
B3RXL1_TRIAD	B3RX95_TRIAD	B3RXL1	B3RX95	Uncharacterized protein.	Uncharacterized protein.	0.416
B3RXL1_TRIAD	B3S2Q7_TRIAD	B3RXL1	B3S2Q7	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.530
B3RXL1_TRIAD	B3S6C0_TRIAD	B3RXL1	B3S6C0	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.530
B3S0A5_TRIAD	B3RR69_TRIAD	B3S0A5	B3RR69	Uncharacterized protein.	FAM35_C domain-containing protein.	0.918
B3S2Q7_TRIAD	B3RXL1_TRIAD	B3S2Q7	B3RXL1	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.530
B3S2Q7_TRIAD	B3S351_TRIAD	B3S2Q7	B3S351	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.724
B3S2Q7_TRIAD	B3S7P8_TRIAD	B3S2Q7	B3S7P8	Helicase ATP-binding domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.539
B3S344_TRIAD	B3RTH9_TRIAD	B3S344	B3RTH9	Predicted protein.	YL1_C domain-containing protein.	0.763
B3S344_TRIAD	B3S4V5_TRIAD	B3S344	B3S4V5	Predicted protein.	Uncharacterized protein.	0.939
B3S344_TRIAD	B3S8K1_TRIAD	B3S344	B3S8K1	Predicted protein.	Enhancer of polycomb-like protein.	0.779