(48 nodes) Transport vesicle membrane network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3RQA5_TRIAD	Uncharacterized protein. (153 aa)
	B3RQJ7_TRIAD	Uncharacterized protein. (1202 aa)
	B3RQS6_TRIAD	Uncharacterized protein. (367 aa)
	B3RRE3_TRIAD	t-SNARE coiled-coil homology domain-containing protein. (280 aa)
	B3RRI8_TRIAD	Uncharacterized protein. (1141 aa)
	B3RS85_TRIAD	Uncharacterized protein. (294 aa)
	B3RJN7_TRIAD	V-SNARE coiled-coil homology domain-containing protein. (130 aa)
	B3RMZ9_TRIAD	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (211 aa)
	B3RNA5_TRIAD	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (180 aa)
	B3SES1_TRIAD	MFS domain-containing protein. (114 aa)
	B3SD76_TRIAD	BHLH domain-containing protein. (992 aa)
	B3SCV0_TRIAD	Sortilin. (875 aa)
	B3SCN9_TRIAD	V-SNARE domain-containing protein. (212 aa)
	B3SCN7_TRIAD	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (780 aa)
	Syt1	Synaptotagmin 1. (383 aa)
	B3RND4_TRIAD	Predicted protein. (1156 aa)
	B3RNE2_TRIAD	t-SNARE coiled-coil homology domain-containing protein. (244 aa)
	B3RP94_TRIAD	Protein transport protein sec16. (1642 aa)
	B3RPB1_TRIAD	Uncharacterized protein; Belongs to the synaptobrevin family. (215 aa)
	B3S861_TRIAD	Uncharacterized protein. (763 aa)
	B3SAN9_TRIAD	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1690 aa)
	B3SBV2_TRIAD	TSNAXIP1_N domain-containing protein. (574 aa)
	B3RPX1_TRIAD	Synaptogyrin. (261 aa)
	B3S6T4_TRIAD	Uncharacterized protein. (183 aa)
	B3S793_TRIAD	Uncharacterized protein; Belongs to the synaptobrevin family. (222 aa)
	B3S7H4_TRIAD	AP-1 complex subunit gamma. (775 aa)
	B3S7I7_TRIAD	V-SNARE domain-containing protein. (213 aa)
	B3S7K7_TRIAD	Predicted protein. (543 aa)
	B3S7V5_TRIAD	MFS domain-containing protein. (458 aa)
	B3RI97_TRIAD	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	B3RIL2_TRIAD	MARVEL domain-containing protein. (274 aa)
	B3RIX6_TRIAD	Uncharacterized protein. (187 aa)
	B3RJM4_TRIAD	Clathrin-link domain-containing protein. (490 aa)
	B3RJM5_TRIAD	Uncharacterized protein. (242 aa)
	Sytwll	Synaptotagmin with longer linker. (539 aa)
	B3RTW8_TRIAD	Uso1_p115_head domain-containing protein. (606 aa)
	B3RUX0_TRIAD	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (314 aa)
	B3RX02_TRIAD	MARVEL domain-containing protein. (198 aa)
	B3RYC6_TRIAD	DUF1981 domain-containing protein. (2314 aa)
	B3RZP5_TRIAD	Vamp. (102 aa)
	B3S339_TRIAD	Sortilin. (815 aa)
	B3S340_TRIAD	Sortilin. (490 aa)
	B3S424_TRIAD	Uncharacterized protein. (217 aa)
	B3S452_TRIAD	Uncharacterized protein. (257 aa)
	B3S4Q3_TRIAD	Uncharacterized protein. (1011 aa)
	B3S628_TRIAD	Uncharacterized protein; Belongs to the synaptobrevin family. (195 aa)
	B3S631_TRIAD	WD_REPEATS_REGION domain-containing protein. (978 aa)
	B3S654_TRIAD	Uncharacterized protein. (706 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RI97_TRIAD	B3RMZ9_TRIAD	B3RI97	B3RMZ9	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.734
B3RI97_TRIAD	B3RP94_TRIAD	B3RI97	B3RP94	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein sec16.	0.952
B3RI97_TRIAD	B3RPB1_TRIAD	B3RI97	B3RPB1	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.864
B3RI97_TRIAD	B3RTW8_TRIAD	B3RI97	B3RTW8	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uso1_p115_head domain-containing protein.	0.440
B3RI97_TRIAD	B3RUX0_TRIAD	B3RI97	B3RUX0	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.993
B3RI97_TRIAD	B3S4Q3_TRIAD	B3RI97	B3S4Q3	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.954
B3RI97_TRIAD	B3S631_TRIAD	B3RI97	B3S631	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.998
B3RI97_TRIAD	B3S654_TRIAD	B3RI97	B3S654	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.993
B3RI97_TRIAD	B3SCN7_TRIAD	B3RI97	B3SCN7	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.996
B3RIL2_TRIAD	B3RJN7_TRIAD	B3RIL2	B3RJN7	MARVEL domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.637
B3RIL2_TRIAD	B3RZP5_TRIAD	B3RIL2	B3RZP5	MARVEL domain-containing protein.	Vamp.	0.777
B3RIL2_TRIAD	Syt1	B3RIL2	B3SBZ4	MARVEL domain-containing protein.	Synaptotagmin 1.	0.714
B3RIL2_TRIAD	Sytwll	B3RIL2	B3RSE3	MARVEL domain-containing protein.	Synaptotagmin with longer linker.	0.516
B3RJM4_TRIAD	B3RJM5_TRIAD	B3RJM4	B3RJM5	Clathrin-link domain-containing protein.	Uncharacterized protein.	0.936
B3RJM4_TRIAD	B3RJN7_TRIAD	B3RJM4	B3RJN7	Clathrin-link domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.421
B3RJM4_TRIAD	B3RNA5_TRIAD	B3RJM4	B3RNA5	Clathrin-link domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.939
B3RJM4_TRIAD	B3RND4_TRIAD	B3RJM4	B3RND4	Clathrin-link domain-containing protein.	Predicted protein.	0.752
B3RJM4_TRIAD	B3RZP5_TRIAD	B3RJM4	B3RZP5	Clathrin-link domain-containing protein.	Vamp.	0.498
B3RJM4_TRIAD	B3S339_TRIAD	B3RJM4	B3S339	Clathrin-link domain-containing protein.	Sortilin.	0.755
B3RJM4_TRIAD	B3S340_TRIAD	B3RJM4	B3S340	Clathrin-link domain-containing protein.	Sortilin.	0.755