(9 nodes) Smc5-Smc6 complex network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3S8C6_TRIAD	SMC_N domain-containing protein. (873 aa)
	B3S9S4_TRIAD	AAA_23 domain-containing protein. (248 aa)
	B3S9S5_TRIAD	Uncharacterized protein. (507 aa)
	B3S9S6_TRIAD	AAA_23 domain-containing protein. (385 aa)
	B3SAY9_TRIAD	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (240 aa)
	B3S9S7_TRIAD	SMC_N domain-containing protein. (830 aa)
	B3S2D3_TRIAD	zf-RING-like domain-containing protein. (213 aa)
	B3S7I2_TRIAD	SP-RING-type domain-containing protein. (217 aa)
	B3S8C3_TRIAD	SMC_N domain-containing protein. (951 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3S2D3_TRIAD	B3S7I2_TRIAD	B3S2D3	B3S7I2	zf-RING-like domain-containing protein.	SP-RING-type domain-containing protein.	0.999
B3S2D3_TRIAD	B3S8C3_TRIAD	B3S2D3	B3S8C3	zf-RING-like domain-containing protein.	SMC_N domain-containing protein.	0.982
B3S2D3_TRIAD	B3S8C6_TRIAD	B3S2D3	B3S8C6	zf-RING-like domain-containing protein.	SMC_N domain-containing protein.	0.982
B3S2D3_TRIAD	B3S9S4_TRIAD	B3S2D3	B3S9S4	zf-RING-like domain-containing protein.	AAA_23 domain-containing protein.	0.924
B3S2D3_TRIAD	B3S9S5_TRIAD	B3S2D3	B3S9S5	zf-RING-like domain-containing protein.	Uncharacterized protein.	0.928
B3S2D3_TRIAD	B3S9S6_TRIAD	B3S2D3	B3S9S6	zf-RING-like domain-containing protein.	AAA_23 domain-containing protein.	0.928
B3S2D3_TRIAD	B3S9S7_TRIAD	B3S2D3	B3S9S7	zf-RING-like domain-containing protein.	SMC_N domain-containing protein.	0.928
B3S2D3_TRIAD	B3SAY9_TRIAD	B3S2D3	B3SAY9	zf-RING-like domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.999
B3S7I2_TRIAD	B3S2D3_TRIAD	B3S7I2	B3S2D3	SP-RING-type domain-containing protein.	zf-RING-like domain-containing protein.	0.999
B3S7I2_TRIAD	B3S8C3_TRIAD	B3S7I2	B3S8C3	SP-RING-type domain-containing protein.	SMC_N domain-containing protein.	0.982
B3S7I2_TRIAD	B3S8C6_TRIAD	B3S7I2	B3S8C6	SP-RING-type domain-containing protein.	SMC_N domain-containing protein.	0.982
B3S7I2_TRIAD	B3S9S4_TRIAD	B3S7I2	B3S9S4	SP-RING-type domain-containing protein.	AAA_23 domain-containing protein.	0.924
B3S7I2_TRIAD	B3S9S5_TRIAD	B3S7I2	B3S9S5	SP-RING-type domain-containing protein.	Uncharacterized protein.	0.932
B3S7I2_TRIAD	B3S9S6_TRIAD	B3S7I2	B3S9S6	SP-RING-type domain-containing protein.	AAA_23 domain-containing protein.	0.932
B3S7I2_TRIAD	B3S9S7_TRIAD	B3S7I2	B3S9S7	SP-RING-type domain-containing protein.	SMC_N domain-containing protein.	0.932
B3S7I2_TRIAD	B3SAY9_TRIAD	B3S7I2	B3SAY9	SP-RING-type domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.999
B3S8C3_TRIAD	B3S2D3_TRIAD	B3S8C3	B3S2D3	SMC_N domain-containing protein.	zf-RING-like domain-containing protein.	0.982
B3S8C3_TRIAD	B3S7I2_TRIAD	B3S8C3	B3S7I2	SMC_N domain-containing protein.	SP-RING-type domain-containing protein.	0.982
B3S8C3_TRIAD	B3S8C6_TRIAD	B3S8C3	B3S8C6	SMC_N domain-containing protein.	SMC_N domain-containing protein.	0.543
B3S8C3_TRIAD	B3S9S4_TRIAD	B3S8C3	B3S9S4	SMC_N domain-containing protein.	AAA_23 domain-containing protein.	0.900