(45 nodes) DNA packaging complex network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3S4V5_TRIAD	Uncharacterized protein. (123 aa)
	B3S5L8_TRIAD	Uncharacterized protein; Belongs to the actin family. (432 aa)
	B3S7K4_TRIAD	Histone H2A; Belongs to the histone H2A family. (137 aa)
	B3S8C5_TRIAD	OB domain-containing protein. (313 aa)
	B3S8K1_TRIAD	Enhancer of polycomb-like protein. (196 aa)
	B3S8K2_TRIAD	Uncharacterized protein. (54 aa)
	B3S8N4_TRIAD	Uncharacterized protein. (675 aa)
	B3S8Z1_TRIAD	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (705 aa)
	B3S903_TRIAD	SMC hinge domain-containing protein. (1038 aa)
	B3SB21_TRIAD	Uncharacterized protein. (870 aa)
	B3RMU8_TRIAD	Uncharacterized protein. (420 aa)
	B3RLS9_TRIAD	Uncharacterized protein. (1204 aa)
	B3RPP1_TRIAD	DUF5595 domain-containing protein. (582 aa)
	B3RQ77_TRIAD	Uncharacterized protein. (1383 aa)
	B3RLU8_TRIAD	Uncharacterized protein. (624 aa)
	B3RQA0_TRIAD	H15 domain-containing protein. (190 aa)
	B3RRN4_TRIAD	Histone domain-containing protein; Belongs to the histone H2B family. (147 aa)
	B3RRY1_TRIAD	MPN domain-containing protein. (509 aa)
	B3RSA2_TRIAD	Predicted protein. (1491 aa)
	B3RT31_TRIAD	Uncharacterized protein. (1137 aa)
	B3RTA2_TRIAD	Uncharacterized protein. (243 aa)
	B3RTH9_TRIAD	YL1_C domain-containing protein. (445 aa)
	B3RUA7_TRIAD	SCD domain-containing protein. (1186 aa)
	B3RUM8_TRIAD	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	B3RVA0_TRIAD	Histone H2A; Belongs to the histone H2A family. (127 aa)
	B3RVS6_TRIAD	Macro domain-containing protein; Belongs to the histone H2A family. (354 aa)
	B3RW52_TRIAD	Uncharacterized protein. (906 aa)
	B3RWE2_TRIAD	Histone H3; Belongs to the histone H3 family. (136 aa)
	B3RX95_TRIAD	Uncharacterized protein. (582 aa)
	B3RLF3_TRIAD	Cnd1 domain-containing protein. (1153 aa)
	B3RJD3_TRIAD	Predicted protein. (907 aa)
	B3RNV3_TRIAD	Histone domain-containing protein. (142 aa)
	B3RPJ8_TRIAD	HMG box domain-containing protein. (329 aa)
	B3RMC3_TRIAD	Uncharacterized protein. (1180 aa)
	B3RXV5_TRIAD	SMC_N domain-containing protein. (126 aa)
	B3RXV6_TRIAD	SMC_N domain-containing protein. (320 aa)
	B3RY55_TRIAD	Uncharacterized protein. (314 aa)
	B3RZP6_TRIAD	Uncharacterized protein. (443 aa)
	B3RZQ5_TRIAD	Histone H3; Belongs to the histone H3 family. (136 aa)
	B3S095_TRIAD	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1245 aa)
	B3S1Y0_TRIAD	Uncharacterized protein. (425 aa)
	B3S291_TRIAD	Rad21_Rec8_N domain-containing protein. (134 aa)
	B3S2I2_TRIAD	Histone H2B; Belongs to the histone H2B family. (124 aa)
	B3S344_TRIAD	Predicted protein. (830 aa)
	B3S4K9_TRIAD	Uncharacterized protein. (167 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RJD3_TRIAD	B3S8C5_TRIAD	B3RJD3	B3S8C5	Predicted protein.	OB domain-containing protein.	0.698
B3RLF3_TRIAD	B3RLU8_TRIAD	B3RLF3	B3RLU8	Cnd1 domain-containing protein.	Uncharacterized protein.	0.998
B3RLF3_TRIAD	B3RMC3_TRIAD	B3RLF3	B3RMC3	Cnd1 domain-containing protein.	Uncharacterized protein.	0.998
B3RLF3_TRIAD	B3RPP1_TRIAD	B3RLF3	B3RPP1	Cnd1 domain-containing protein.	DUF5595 domain-containing protein.	0.444
B3RLF3_TRIAD	B3RUM8_TRIAD	B3RLF3	B3RUM8	Cnd1 domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.581
B3RLF3_TRIAD	B3RVA0_TRIAD	B3RLF3	B3RVA0	Cnd1 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.673
B3RLF3_TRIAD	B3RXV5_TRIAD	B3RLF3	B3RXV5	Cnd1 domain-containing protein.	SMC_N domain-containing protein.	0.566
B3RLF3_TRIAD	B3RXV6_TRIAD	B3RLF3	B3RXV6	Cnd1 domain-containing protein.	SMC_N domain-containing protein.	0.566
B3RLF3_TRIAD	B3S095_TRIAD	B3RLF3	B3S095	Cnd1 domain-containing protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.756
B3RLF3_TRIAD	B3S2I2_TRIAD	B3RLF3	B3S2I2	Cnd1 domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.409
B3RLF3_TRIAD	B3S7K4_TRIAD	B3RLF3	B3S7K4	Cnd1 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.438
B3RLF3_TRIAD	B3S8Z1_TRIAD	B3RLF3	B3S8Z1	Cnd1 domain-containing protein.	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.	0.867
B3RLF3_TRIAD	B3S903_TRIAD	B3RLF3	B3S903	Cnd1 domain-containing protein.	SMC hinge domain-containing protein.	0.765
B3RLF3_TRIAD	B3SB21_TRIAD	B3RLF3	B3SB21	Cnd1 domain-containing protein.	Uncharacterized protein.	0.755
B3RLS9_TRIAD	B3RNV3_TRIAD	B3RLS9	B3RNV3	Uncharacterized protein.	Histone domain-containing protein.	0.778
B3RLS9_TRIAD	B3RPJ8_TRIAD	B3RLS9	B3RPJ8	Uncharacterized protein.	HMG box domain-containing protein.	0.965
B3RLS9_TRIAD	B3RRN4_TRIAD	B3RLS9	B3RRN4	Uncharacterized protein.	Histone domain-containing protein; Belongs to the histone H2B family.	0.422
B3RLS9_TRIAD	B3RT31_TRIAD	B3RLS9	B3RT31	Uncharacterized protein.	Uncharacterized protein.	0.989
B3RLS9_TRIAD	B3RUM8_TRIAD	B3RLS9	B3RUM8	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.876
B3RLS9_TRIAD	B3RVS6_TRIAD	B3RLS9	B3RVS6	Uncharacterized protein.	Macro domain-containing protein; Belongs to the histone H2A family.	0.660