(58 nodes) Positive regulation of cell cycle network (Trichoplax adhaerens)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3RI66_TRIAD	CULLIN_2 domain-containing protein; Belongs to the cullin family. (721 aa)
	B3RID9_TRIAD	Uncharacterized protein. (436 aa)
	B3RJD3_TRIAD	Predicted protein. (907 aa)
	B3RJT9_TRIAD	RING-type domain-containing protein. (297 aa)
	B3RK31_TRIAD	Uncharacterized protein. (530 aa)
	B3RK57_TRIAD	Uncharacterized protein. (182 aa)
	B3RK66_TRIAD	Uncharacterized protein. (363 aa)
	B3RK76_TRIAD	Predicted protein. (251 aa)
	B3RKR8_TRIAD	Homeobox domain-containing protein. (272 aa)
	B3RL52_TRIAD	Uncharacterized protein. (426 aa)
	B3RLW9_TRIAD	BRCT domain-containing protein. (209 aa)
	B3RLX0_TRIAD	Uncharacterized protein. (610 aa)
	B3RLX3_TRIAD	Uncharacterized protein. (1172 aa)
	B3RMX7_TRIAD	Uncharacterized protein. (268 aa)
	B3RN64_TRIAD	Uncharacterized protein. (347 aa)
	B3RN72_TRIAD	Uncharacterized protein. (827 aa)
	B3RND5_TRIAD	Uncharacterized protein. (575 aa)
	B3RNP3_TRIAD	TPR_REGION domain-containing protein. (543 aa)
	B3RNV8_TRIAD	TFIIS N-terminal domain-containing protein. (674 aa)
	B3RP33_TRIAD	ANAPC5 domain-containing protein. (560 aa)
	B3RPP1_TRIAD	DUF5595 domain-containing protein. (582 aa)
	B3RPQ8_TRIAD	Predicted protein. (1416 aa)
	B3RPQ9_TRIAD	WD_REPEATS_REGION domain-containing protein. (1262 aa)
	B3RRI2_TRIAD	TPR_REGION domain-containing protein. (360 aa)
	B3RRT9_TRIAD	Uncharacterized protein. (1256 aa)
	B3RS42_TRIAD	AAA domain-containing protein. (369 aa)
	B3RSI0_TRIAD	HORMA domain-containing protein. (203 aa)
	B3RSR1_TRIAD	Uncharacterized protein. (962 aa)
	B3RSW4_TRIAD	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (79 aa)
	B3RT03_TRIAD	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (284 aa)
	B3RT36_TRIAD	E2F_TDP domain-containing protein. (138 aa)
	B3RTK6_TRIAD	CULLIN_2 domain-containing protein; Belongs to the cullin family. (729 aa)
	B3RV97_TRIAD	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (180 aa)
	B3RVJ1_TRIAD	Uncharacterized protein. (441 aa)
	B3RWD7_TRIAD	Sm domain-containing protein. (115 aa)
	B3RXB7_TRIAD	WD_REPEATS_REGION domain-containing protein. (510 aa)
	B3RYS9_TRIAD	Uncharacterized protein; Belongs to the cyclin family. (272 aa)
	B3RZE0_TRIAD	Uncharacterized protein. (370 aa)
	B3S1K9_TRIAD	ApaG domain-containing protein. (299 aa)
	B3S1W9_TRIAD	Uncharacterized protein. (976 aa)
	B3S1X0_TRIAD	Uncharacterized protein; Belongs to the protein kinase superfamily. (423 aa)
	B3S2H1_TRIAD	Uncharacterized protein. (441 aa)
	B3S370_TRIAD	Rhodanese domain-containing protein. (538 aa)
	B3S3D3_TRIAD	Predicted protein. (465 aa)
	B3S3U7_TRIAD	PDZ domain-containing protein. (358 aa)
	B3S577_TRIAD	Uncharacterized protein. (2314 aa)
	B3S5G1_TRIAD	TPR_REGION domain-containing protein. (452 aa)
	B3S6B3_TRIAD	RING-type domain-containing protein. (86 aa)
	B3S6E5_TRIAD	Uncharacterized protein. (718 aa)
	B3S767_TRIAD	Uncharacterized protein. (976 aa)
	B3S7L6_TRIAD	Uncharacterized protein. (820 aa)
	B3S853_TRIAD	CYCLIN domain-containing protein; Belongs to the cyclin family. (221 aa)
	B3S8C3_TRIAD	SMC_N domain-containing protein. (951 aa)
	B3S8C6_TRIAD	SMC_N domain-containing protein. (873 aa)
	B3S8H5_TRIAD	CYCLIN domain-containing protein; Belongs to the cyclin family. (195 aa)
	B3S904_TRIAD	Uncharacterized protein. (1049 aa)
	B3SAG2_TRIAD	Uncharacterized protein. (1395 aa)
	B3SB21_TRIAD	Uncharacterized protein. (870 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RI66_TRIAD	B3RSW4_TRIAD	B3RI66	B3RSW4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.665
B3RI66_TRIAD	B3RT03_TRIAD	B3RI66	B3RT03	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.638
B3RI66_TRIAD	B3RTK6_TRIAD	B3RI66	B3RTK6	CULLIN_2 domain-containing protein; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.575
B3RI66_TRIAD	B3S6B3_TRIAD	B3RI66	B3S6B3	CULLIN_2 domain-containing protein; Belongs to the cullin family.	RING-type domain-containing protein.	0.669
B3RI66_TRIAD	B3S7L6_TRIAD	B3RI66	B3S7L6	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.463
B3RJD3_TRIAD	B3RPQ8_TRIAD	B3RJD3	B3RPQ8	Predicted protein.	Predicted protein.	0.424
B3RJD3_TRIAD	B3RS42_TRIAD	B3RJD3	B3RS42	Predicted protein.	AAA domain-containing protein.	0.671
B3RJD3_TRIAD	B3S8C3_TRIAD	B3RJD3	B3S8C3	Predicted protein.	SMC_N domain-containing protein.	0.445
B3RJD3_TRIAD	B3S8C6_TRIAD	B3RJD3	B3S8C6	Predicted protein.	SMC_N domain-containing protein.	0.445
B3RJT9_TRIAD	B3RT03_TRIAD	B3RJT9	B3RT03	RING-type domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.447
B3RJT9_TRIAD	B3RTK6_TRIAD	B3RJT9	B3RTK6	RING-type domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.685
B3RJT9_TRIAD	B3RYS9_TRIAD	B3RJT9	B3RYS9	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.862
B3RJT9_TRIAD	B3S6B3_TRIAD	B3RJT9	B3S6B3	RING-type domain-containing protein.	RING-type domain-containing protein.	0.486
B3RJT9_TRIAD	B3S8H5_TRIAD	B3RJT9	B3S8H5	RING-type domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.807
B3RK31_TRIAD	B3RNP3_TRIAD	B3RK31	B3RNP3	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.996
B3RK31_TRIAD	B3RP33_TRIAD	B3RK31	B3RP33	Uncharacterized protein.	ANAPC5 domain-containing protein.	0.999
B3RK31_TRIAD	B3RRI2_TRIAD	B3RK31	B3RRI2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999
B3RK31_TRIAD	B3RS42_TRIAD	B3RK31	B3RS42	Uncharacterized protein.	AAA domain-containing protein.	0.516
B3RK31_TRIAD	B3RSI0_TRIAD	B3RK31	B3RSI0	Uncharacterized protein.	HORMA domain-containing protein.	0.922
B3RK31_TRIAD	B3RV97_TRIAD	B3RK31	B3RV97	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.869