(19 nodes) Anatomical structure homeostasis network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3RWV2_TRIAD	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (177 aa)
	B3RVS4_TRIAD	Predicted protein. (1278 aa)
	B3RXY6_TRIAD	Predicted protein. (363 aa)
	B3S012_TRIAD	Uncharacterized protein. (466 aa)
	B3S0U8_TRIAD	Predicted protein. (332 aa)
	B3RSZ8_TRIAD	WD_REPEATS_REGION domain-containing protein. (321 aa)
	B3S7L6_TRIAD	Uncharacterized protein. (820 aa)
	B3S7T9_TRIAD	Uncharacterized protein; Belongs to the MAGUK family. (1727 aa)
	B3RRN5_TRIAD	Uncharacterized protein. (210 aa)
	B3RR15_TRIAD	Uncharacterized protein. (620 aa)
	B3RPR1_TRIAD	Uncharacterized protein. (1207 aa)
	B3S9A6_TRIAD	Predicted protein. (1287 aa)
	B3SAM9_TRIAD	Uncharacterized protein. (541 aa)
	B3RPQ7_TRIAD	Uncharacterized protein. (594 aa)
	B3RNV0_TRIAD	Uncharacterized protein. (362 aa)
	B3SCL7_TRIAD	Uncharacterized protein. (206 aa)
	B3RJ74_TRIAD	Uncharacterized protein. (147 aa)
	B3RVX0_TRIAD	Uncharacterized protein. (220 aa)
	B3RWM9_TRIAD	Uncharacterized protein. (661 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RNV0_TRIAD	B3RR15_TRIAD	B3RNV0	B3RR15	Uncharacterized protein.	Uncharacterized protein.	0.736
B3RPQ7_TRIAD	B3S012_TRIAD	B3RPQ7	B3S012	Uncharacterized protein.	Uncharacterized protein.	0.641
B3RPQ7_TRIAD	B3S0U8_TRIAD	B3RPQ7	B3S0U8	Uncharacterized protein.	Predicted protein.	0.463
B3RR15_TRIAD	B3RNV0_TRIAD	B3RR15	B3RNV0	Uncharacterized protein.	Uncharacterized protein.	0.736
B3RR15_TRIAD	B3SAM9_TRIAD	B3RR15	B3SAM9	Uncharacterized protein.	Uncharacterized protein.	0.487
B3S012_TRIAD	B3RPQ7_TRIAD	B3S012	B3RPQ7	Uncharacterized protein.	Uncharacterized protein.	0.641
B3S012_TRIAD	B3S0U8_TRIAD	B3S012	B3S0U8	Uncharacterized protein.	Predicted protein.	0.407
B3S012_TRIAD	B3SAM9_TRIAD	B3S012	B3SAM9	Uncharacterized protein.	Uncharacterized protein.	0.658
B3S0U8_TRIAD	B3RPQ7_TRIAD	B3S0U8	B3RPQ7	Predicted protein.	Uncharacterized protein.	0.463
B3S0U8_TRIAD	B3S012_TRIAD	B3S0U8	B3S012	Predicted protein.	Uncharacterized protein.	0.407
B3SAM9_TRIAD	B3RR15_TRIAD	B3SAM9	B3RR15	Uncharacterized protein.	Uncharacterized protein.	0.487
B3SAM9_TRIAD	B3S012_TRIAD	B3SAM9	B3S012	Uncharacterized protein.	Uncharacterized protein.	0.658