(72 nodes) Regulation of vesicle-mediated transport network (Trichoplax adhaerens)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rabphilin	Rabphilin. (642 aa)
	B3RI97_TRIAD	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	B3RIC3_TRIAD	LisH domain-containing protein. (740 aa)
	B3RJ26_TRIAD	Peptidase_S8 domain-containing protein. (649 aa)
	B3RJ28_TRIAD	Uncharacterized protein; Belongs to the AAA ATPase family. (431 aa)
	B3RJ69_TRIAD	DAGKc domain-containing protein. (536 aa)
	B3RJL0_TRIAD	Fmp27_GFWDK domain-containing protein. (1497 aa)
	B3RJQ2_TRIAD	MHD domain-containing protein. (150 aa)
	B3RK53_TRIAD	C2 domain-containing protein. (959 aa)
	B3RM58_TRIAD	Uncharacterized protein. (182 aa)
	B3RM76_TRIAD	Uncharacterized protein. (212 aa)
	B3RMJ9_TRIAD	Uncharacterized protein. (372 aa)
	B3RN26_TRIAD	Uncharacterized protein. (645 aa)
	B3RN71_TRIAD	VPS9 domain-containing protein. (212 aa)
	B3RN86_TRIAD	Uncharacterized protein. (114 aa)
	Syt	Synaptotagmin. (467 aa)
	B3RNI0_TRIAD	Autophagy protein 5; Involved in autophagic vesicle formation. (272 aa)
	B3RPI8_TRIAD	PX domain-containing protein. (457 aa)
	B3RPZ2_TRIAD	DAGKc domain-containing protein. (348 aa)
	B3RR77_TRIAD	J domain-containing protein. (2223 aa)
	B3RRC5_TRIAD	Uncharacterized protein. (229 aa)
	B3RS29_TRIAD	Predicted protein. (423 aa)
	Sytwll	Synaptotagmin with longer linker. (539 aa)
	B3RU29_TRIAD	Uncharacterized protein. (216 aa)
	B3RUJ9_TRIAD	Uncharacterized protein. (1120 aa)
	B3RVH2_TRIAD	Rab-GAP TBC domain-containing protein. (294 aa)
	B3RVQ4_TRIAD	Protein kinase domain-containing protein. (310 aa)
	B3RWV2_TRIAD	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (177 aa)
	B3RX42_TRIAD	Uncharacterized protein. (127 aa)
	B3RXQ4_TRIAD	LLGL domain-containing protein. (751 aa)
	B3RXY6_TRIAD	Predicted protein. (363 aa)
	B3RY20_TRIAD	RBR-type E3 ubiquitin transferase. (325 aa)
	B3RY40_TRIAD	PDZ domain-containing protein. (352 aa)
	B3RYD3_TRIAD	ENTH domain-containing protein. (308 aa)
	B3RYS4_TRIAD	Uncharacterized protein. (304 aa)
	B3S036_TRIAD	Uncharacterized protein. (201 aa)
	B3S0F8_TRIAD	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (585 aa)
	B3S197_TRIAD	WD_REPEATS_REGION domain-containing protein. (397 aa)
	B3S225_TRIAD	PID domain-containing protein. (302 aa)
	B3S240_TRIAD	Arf-GAP domain-containing protein. (455 aa)
	B3S2N9_TRIAD	Uncharacterized protein. (205 aa)
	B3S2Q9_TRIAD	Uncharacterized protein. (1149 aa)
	B3S300_TRIAD	Uncharacterized protein. (1073 aa)
	B3S339_TRIAD	Sortilin. (815 aa)
	B3S340_TRIAD	Sortilin. (490 aa)
	B3S3U7_TRIAD	PDZ domain-containing protein. (358 aa)
	B3S3X8_TRIAD	PID domain-containing protein. (840 aa)
	B3S4A0_TRIAD	I/LWEQ domain-containing protein. (936 aa)
	B3S4F2_TRIAD	ANK_REP_REGION domain-containing protein. (628 aa)
	B3S4G7_TRIAD	VPS9 domain-containing protein. (371 aa)
	B3S4Y9_TRIAD	Uncharacterized protein. (222 aa)
	B3S5Q2_TRIAD	Uncharacterized protein. (440 aa)
	B3SDI7_TRIAD	Uncharacterized protein. (541 aa)
	B3S6C9_TRIAD	Uncharacterized protein. (214 aa)
	B3S7R8_TRIAD	Uncharacterized protein. (207 aa)
	B3S834_TRIAD	Uncharacterized protein. (1532 aa)
	B3S8D8_TRIAD	Uncharacterized protein. (1097 aa)
	B3S8D9_TRIAD	Uncharacterized protein. (788 aa)
	B3S8T8_TRIAD	WD_REPEATS_REGION domain-containing protein. (321 aa)
	B3S9A3_TRIAD	Rap-GAP domain-containing protein. (1711 aa)
	B3S9F4_TRIAD	Uncharacterized protein. (525 aa)
	B3S9L6_TRIAD	PX domain-containing protein. (164 aa)
	B3SBV9_TRIAD	Uncharacterized protein. (155 aa)
	B3SBY4_TRIAD	Uncharacterized protein. (383 aa)
	B3SBY9_TRIAD	Uncharacterized protein. (372 aa)
	B3SBZ1_TRIAD	Ion_trans domain-containing protein. (460 aa)
	Syt1	Synaptotagmin 1. (383 aa)
	Syt7	Synaptotagmin 7. (373 aa)
	B3SC29_TRIAD	UEV domain-containing protein. (103 aa)
	B3SCH5_TRIAD	Phorbol-ester/DAG-type domain-containing protein. (171 aa)
	B3SCV0_TRIAD	Sortilin. (875 aa)
	Syt15	Synaptotagmin 15. (370 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RI97_TRIAD	B3S197_TRIAD	B3RI97	B3S197	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.999
B3RJ28_TRIAD	B3S834_TRIAD	B3RJ28	B3S834	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.624
B3RJ28_TRIAD	B3SBY4_TRIAD	B3RJ28	B3SBY4	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.556
B3RJ28_TRIAD	B3SC29_TRIAD	B3RJ28	B3SC29	Uncharacterized protein; Belongs to the AAA ATPase family.	UEV domain-containing protein.	0.556
B3RJ69_TRIAD	B3RPZ2_TRIAD	B3RJ69	B3RPZ2	DAGKc domain-containing protein.	DAGKc domain-containing protein.	0.904
B3RJQ2_TRIAD	B3RYD3_TRIAD	B3RJQ2	B3RYD3	MHD domain-containing protein.	ENTH domain-containing protein.	0.824
B3RJQ2_TRIAD	B3S3X8_TRIAD	B3RJQ2	B3S3X8	MHD domain-containing protein.	PID domain-containing protein.	0.783
B3RJQ2_TRIAD	Syt	B3RJQ2	B3RND7	MHD domain-containing protein.	Synaptotagmin.	0.406
B3RJQ2_TRIAD	Syt1	B3RJQ2	B3SBZ4	MHD domain-containing protein.	Synaptotagmin 1.	0.950
B3RJQ2_TRIAD	Syt15	B3RJQ2	B3SDG8	MHD domain-containing protein.	Synaptotagmin 15.	0.406
B3RJQ2_TRIAD	Syt7	B3RJQ2	B3SBZ5	MHD domain-containing protein.	Synaptotagmin 7.	0.406
B3RJQ2_TRIAD	Sytwll	B3RJQ2	B3RSE3	MHD domain-containing protein.	Synaptotagmin with longer linker.	0.868
B3RM58_TRIAD	B3RM76_TRIAD	B3RM58	B3RM76	Uncharacterized protein.	Uncharacterized protein.	0.905
B3RM58_TRIAD	B3RN71_TRIAD	B3RM58	B3RN71	Uncharacterized protein.	VPS9 domain-containing protein.	0.509
B3RM58_TRIAD	B3RU29_TRIAD	B3RM58	B3RU29	Uncharacterized protein.	Uncharacterized protein.	0.545
B3RM58_TRIAD	B3RX42_TRIAD	B3RM58	B3RX42	Uncharacterized protein.	Uncharacterized protein.	0.670
B3RM58_TRIAD	B3S2N9_TRIAD	B3RM58	B3S2N9	Uncharacterized protein.	Uncharacterized protein.	0.547
B3RM58_TRIAD	B3S2Q9_TRIAD	B3RM58	B3S2Q9	Uncharacterized protein.	Uncharacterized protein.	0.420
B3RM58_TRIAD	B3S339_TRIAD	B3RM58	B3S339	Uncharacterized protein.	Sortilin.	0.431
B3RM58_TRIAD	B3S340_TRIAD	B3RM58	B3S340	Uncharacterized protein.	Sortilin.	0.431