(14 nodes) SCF ubiquitin ligase complex network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3RW23_TRIAD	Uncharacterized protein; Belongs to the SKP1 family. (169 aa)
	B3SEF0_TRIAD	Uncharacterized protein; Belongs to the SKP1 family. (165 aa)
	B3SC09_TRIAD	Uncharacterized protein. (285 aa)
	B3S422_TRIAD	TPR_REGION domain-containing protein. (309 aa)
	B3S3I4_TRIAD	WD_REPEATS_REGION domain-containing protein. (441 aa)
	B3S3F8_TRIAD	F-box domain-containing protein. (847 aa)
	B3S236_TRIAD	F-box domain-containing protein. (323 aa)
	B3S1B8_TRIAD	Uncharacterized protein. (478 aa)
	B3RZF7_TRIAD	F-box domain-containing protein. (393 aa)
	B3RZF1_TRIAD	F-box domain-containing protein. (415 aa)
	B3RYZ4_TRIAD	F-box domain-containing protein. (313 aa)
	B3RW64_TRIAD	Uncharacterized protein. (280 aa)
	B3RIA7_TRIAD	Roc domain-containing protein. (1038 aa)
	B3RQE1_TRIAD	CULLIN_2 domain-containing protein; Belongs to the cullin family. (761 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RIA7_TRIAD	B3RW23_TRIAD	B3RIA7	B3RW23	Roc domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.543
B3RIA7_TRIAD	B3SEF0_TRIAD	B3RIA7	B3SEF0	Roc domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.543
B3RQE1_TRIAD	B3RW23_TRIAD	B3RQE1	B3RW23	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.964
B3RQE1_TRIAD	B3RW64_TRIAD	B3RQE1	B3RW64	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.814
B3RQE1_TRIAD	B3RYZ4_TRIAD	B3RQE1	B3RYZ4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.787
B3RQE1_TRIAD	B3RZF1_TRIAD	B3RQE1	B3RZF1	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.691
B3RQE1_TRIAD	B3RZF7_TRIAD	B3RQE1	B3RZF7	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.691
B3RQE1_TRIAD	B3S236_TRIAD	B3RQE1	B3S236	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.850
B3RQE1_TRIAD	B3S3F8_TRIAD	B3RQE1	B3S3F8	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.566
B3RQE1_TRIAD	B3S3I4_TRIAD	B3RQE1	B3S3I4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	WD_REPEATS_REGION domain-containing protein.	0.989
B3RQE1_TRIAD	B3S422_TRIAD	B3RQE1	B3S422	CULLIN_2 domain-containing protein; Belongs to the cullin family.	TPR_REGION domain-containing protein.	0.767
B3RQE1_TRIAD	B3SEF0_TRIAD	B3RQE1	B3SEF0	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.964
B3RW23_TRIAD	B3RIA7_TRIAD	B3RW23	B3RIA7	Uncharacterized protein; Belongs to the SKP1 family.	Roc domain-containing protein.	0.543
B3RW23_TRIAD	B3RQE1_TRIAD	B3RW23	B3RQE1	Uncharacterized protein; Belongs to the SKP1 family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.964
B3RW23_TRIAD	B3RW64_TRIAD	B3RW23	B3RW64	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.890
B3RW23_TRIAD	B3RYZ4_TRIAD	B3RW23	B3RYZ4	Uncharacterized protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.755
B3RW23_TRIAD	B3RZF1_TRIAD	B3RW23	B3RZF1	Uncharacterized protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.730
B3RW23_TRIAD	B3RZF7_TRIAD	B3RW23	B3RZF7	Uncharacterized protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.730
B3RW23_TRIAD	B3S1B8_TRIAD	B3RW23	B3S1B8	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.543
B3RW23_TRIAD	B3S236_TRIAD	B3RW23	B3S236	Uncharacterized protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.719