(18 nodes) Tyrosine-protein kinase, catalytic domain network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3RSL5_TRIAD	Protein kinase domain-containing protein. (107 aa)
	B3RT13_TRIAD	Protein kinase domain-containing protein. (302 aa)
	B3RT14_TRIAD	Tyrosine-protein kinase receptor. (295 aa)
	B3SDQ5_TRIAD	Protein kinase domain-containing protein. (144 aa)
	B3RT16_TRIAD	Tyrosine-protein kinase receptor. (449 aa)
	B3RWF6_TRIAD	Protein kinase domain-containing protein. (259 aa)
	B3RWV1_TRIAD	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (328 aa)
	B3S014_TRIAD	Protein kinase domain-containing protein. (218 aa)
	B3S184_TRIAD	Protein kinase domain-containing protein. (267 aa)
	B3S2E4_TRIAD	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (293 aa)
	B3S2E6_TRIAD	Protein kinase domain-containing protein. (271 aa)
	B3S3G7_TRIAD	Uncharacterized protein. (372 aa)
	B3S7Q3_TRIAD	Protein kinase domain-containing protein. (185 aa)
	B3SAI7_TRIAD	Uncharacterized protein. (1069 aa)
	B3SDX6_TRIAD	Protein kinase domain-containing protein. (169 aa)
	B3RL37_TRIAD	Receptor protein-tyrosine kinase. (1278 aa)
	B3RNH4_TRIAD	Protein kinase domain-containing protein. (283 aa)
	B3RRX0_TRIAD	Protein kinase domain-containing protein. (136 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RSL5_TRIAD	B3S184_TRIAD	B3RSL5	B3S184	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.457
B3S184_TRIAD	B3RSL5_TRIAD	B3S184	B3RSL5	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.457
B3S184_TRIAD	B3S2E4_TRIAD	B3S184	B3S2E4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.704
B3S184_TRIAD	B3S2E6_TRIAD	B3S184	B3S2E6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.705
B3S184_TRIAD	B3SAI7_TRIAD	B3S184	B3SAI7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.457
B3S184_TRIAD	B3SDX6_TRIAD	B3S184	B3SDX6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.753
B3S2E4_TRIAD	B3S184_TRIAD	B3S2E4	B3S184	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.704
B3S2E4_TRIAD	B3S7Q3_TRIAD	B3S2E4	B3S7Q3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.400
B3S2E4_TRIAD	B3SDX6_TRIAD	B3S2E4	B3SDX6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.702
B3S2E6_TRIAD	B3S184_TRIAD	B3S2E6	B3S184	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.705
B3S2E6_TRIAD	B3S7Q3_TRIAD	B3S2E6	B3S7Q3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.401
B3S2E6_TRIAD	B3SDX6_TRIAD	B3S2E6	B3SDX6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.702
B3S7Q3_TRIAD	B3S2E4_TRIAD	B3S7Q3	B3S2E4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.400
B3S7Q3_TRIAD	B3S2E6_TRIAD	B3S7Q3	B3S2E6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.401
B3S7Q3_TRIAD	B3SDX6_TRIAD	B3S7Q3	B3SDX6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.448
B3SAI7_TRIAD	B3S184_TRIAD	B3SAI7	B3S184	Uncharacterized protein.	Protein kinase domain-containing protein.	0.457
B3SDX6_TRIAD	B3S184_TRIAD	B3SDX6	B3S184	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.753
B3SDX6_TRIAD	B3S2E4_TRIAD	B3SDX6	B3S2E4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.702
B3SDX6_TRIAD	B3S2E6_TRIAD	B3SDX6	B3S2E6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.702
B3SDX6_TRIAD	B3S7Q3_TRIAD	B3SDX6	B3S7Q3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.448